SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3frm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N9J_A_EAAA210_1
(GLUTATHIONE
S-TRANSFERASE P)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		4 / 8 TYR A 237
VAL A 218
ILE A 205
GLY A 210
 None
 0.96A 3n9jA-3frmA:
undetectable		 3n9jA-3frmA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RAV_A_RAVA183_1
(FERRITIN LIGHT CHAIN)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		4 / 6 LEU A  27
SER A  36
TYR A  25
ALA A  35
 None
 1.04A 3ravA-3frmA:
undetectable		 3ravA-3frmA:
22.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_D_SAMD401_1
(METHYLTRANSFERASE
NSUN4)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		3 / 3 ASP A 177
ARG A 163
ASP A  12
 None
 0.75A 4fp9D-3frmA:
undetectable		 4fp9D-3frmA:
18.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FZV_A_SAMA401_1
(PUTATIVE
METHYLTRANSFERASE
NSUN4)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		3 / 3 ASP A 177
ARG A 163
ASP A  12
 None
 0.77A 4fzvA-3frmA:
undetectable		 4fzvA-3frmA:
19.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OBW_D_SAMD601_1
(2-METHOXY-6-POLYPREN
YL-1,4-BENZOQUINOL
METHYLASE,
MITOCHONDRIAL)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		3 / 3 ASN A  14
ASP A  12
ASP A 160
 None
 0.87A 4obwD-3frmA:
undetectable		 4obwD-3frmA:
22.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X6Y_A_SAMA902_1
(MRNA CAPPING ENZYME
P5)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		3 / 3 TYR A  10
ASP A 177
ASP A  12
 None
 0.78A 5x6yA-3frmA:
undetectable		 5x6yA-3frmA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZVG_A_SAMA401_1
(389AA LONG
HYPOTHETICAL
NUCLEOLAR PROTEIN)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		3 / 3 ASP A 177
ARG A 163
ASP A  12
 None
 0.74A 5zvgA-3frmA:
undetectable		 5zvgA-3frmA:
24.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZVG_B_SAMB401_1
(389AA LONG
HYPOTHETICAL
NUCLEOLAR PROTEIN)		 3frm UNCHARACTERIZED
CONSERVED PROTEIN
(Staphylococcus
epidermidis) 		3 / 3 ASP A 177
ARG A 163
ASP A  12
 None
 0.72A 5zvgB-3frmA:
undetectable		 5zvgB-3frmA:
24.10