SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3gd9'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ERE_E_ESTE600_1
(ESTROGEN RECEPTOR)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 8 MET A 124
ALA A  91
LEU A 128
LEU A  60
 None
 0.95A 1ereE-3gd9A:
undetectable		 1ereE-3gd9A:
19.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ERE_F_ESTF600_1
(ESTROGEN RECEPTOR)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 8 MET A 124
ALA A  91
LEU A 128
LEU A  60
 None
 0.95A 1ereF-3gd9A:
undetectable		 1ereF-3gd9A:
19.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ONI_D_BEZD507_0
(14.5 KDA
TRANSLATIONAL
INHIBITOR PROTEIN)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 7 ALA A 393
ILE A 116
TYR A 155
ILE A 107
 None
 0.96A 1oniD-3gd9A:
undetectable
1oniF-3gd9A:
undetectable		 1oniD-3gd9A:
17.86
1oniF-3gd9A:
17.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T6Z_B_RBFB596_1
(RIBOFLAVIN
KINASE/FMN
ADENYLYLTRANSFERASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 11 VAL A 292
TYR A 273
ARG A 318
LEU A 325
ILE A 321
 None
 1.31A 1t6zB-3gd9A:
undetectable		 1t6zB-3gd9A:
20.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BFP_C_H4BC1290_1
(PTERIDINE REDUCTASE
1)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 8 ARG A 318
PHE A 284
LEU A 260
LEU A 310
 None
 0.90A 2bfpC-3gd9A:
undetectable		 2bfpC-3gd9A:
23.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NXE_A_SAMA302_0
(RIBOSOMAL PROTEIN
L11
METHYLTRANSFERASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 12 ASP A 259
LEU A 260
GLY A 275
ILE A 321
LEU A 282
 None
 0.83A 2nxeA-3gd9A:
undetectable		 2nxeA-3gd9A:
21.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCT_D_ASDD1223_1
(GLUTATHIONE
S-TRANSFERASE A2)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 7 TYR A 155
GLY A 114
LEU A 133
PHE A  78
 None
 1.03A 2vctD-3gd9A:
undetectable		 2vctD-3gd9A:
22.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CJT_C_SAMC302_0
(RIBOSOMAL PROTEIN
L11
METHYLTRANSFERASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 12 ASP A 259
LEU A 260
GLY A 275
ILE A 321
LEU A 282
 None
 0.94A 3cjtC-3gd9A:
undetectable		 3cjtC-3gd9A:
21.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G4L_D_ROFD904_1
(CAMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE 4D)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		3 / 3 ASN A  47
MET A 124
PHE A 118
 None
 1.09A 3g4lD-3gd9A:
undetectable		 3g4lD-3gd9A:
19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_B_CE3B302_2
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		3 / 3 CYH A 306
PRO A 230
ASP A 376
 BGC  A   4 (-4.8A)
None
None
 0.93A 3hlwB-3gd9A:
undetectable		 3hlwB-3gd9A:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_B_CE3B302_2
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		3 / 3 CYH A 326
PRO A 320
ASP A 311
 None
 0.98A 3hlwB-3gd9A:
undetectable		 3hlwB-3gd9A:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LS4_H_TCIH220_2
(HEAVY CHAIN OF
ANTIBODY FAB
FRAGMENT
LIGHT CHAIN OF
ANTIBODY FAB
FRAGMENT)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 5 TYR A 247
ILE A 321
LEU A 325
PHE A 329
 None
 1.20A 3ls4L-3gd9A:
undetectable		 3ls4L-3gd9A:
19.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IFX_A_ACTA404_0
(THIAMINE
BIOSYNTHESIS
LIPOPROTEIN APBE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 5 SER A 322
LYS A 317
LEU A 310
ASP A 311
 None
 1.33A 4ifxA-3gd9A:
undetectable		 4ifxA-3gd9A:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IG1_A_ACTA504_0
(FAD:PROTEIN FMN
TRANSFERASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 5 SER A 322
LYS A 317
LEU A 310
ASP A 311
 None
 1.34A 4ig1A-3gd9A:
undetectable		 4ig1A-3gd9A:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM5_A_CE3A301_2
(BETA-LACTAMASE
CTX-M-14)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		3 / 3 CYH A 306
PRO A 230
ASP A 376
 BGC  A   4 (-4.8A)
None
None
 1.00A 4pm5A-3gd9A:
undetectable		 4pm5A-3gd9A:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM5_A_CE3A301_2
(BETA-LACTAMASE
CTX-M-14)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		3 / 3 CYH A 326
PRO A 320
ASP A 311
 None
 0.97A 4pm5A-3gd9A:
undetectable		 4pm5A-3gd9A:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QB9_D_PARD500_1
(ENHANCED
INTRACELLULAR
SURVIVAL PROTEIN)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 8 SER A 383
THR A 167
SER A 153
ASP A 170
 None
BGC  A   3 (-3.3A)
None
None
 1.15A 4qb9D-3gd9A:
undetectable		 4qb9D-3gd9A:
25.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XDT_A_ACTA406_0
(FAD:PROTEIN FMN
TRANSFERASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 5 SER A 322
LYS A 317
LEU A 310
ASP A 311
 None
 1.34A 4xdtA-3gd9A:
undetectable		 4xdtA-3gd9A:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZN7_B_DESB600_1
(ESTROGEN RECEPTOR)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 11 MET A 124
ALA A  91
LEU A 133
LEU A 128
LEU A  60
 None
 1.16A 4zn7B-3gd9A:
undetectable		 4zn7B-3gd9A:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KC4_E_RBFE201_1
(RIBOFLAVIN
TRANSPORTER RIBU)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 12 LEU A 157
GLY A  76
ASN A  59
LEU A  43
ALA A 393
 None
 1.35A 5kc4E-3gd9A:
undetectable		 5kc4E-3gd9A:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OG9_A_TESA503_1
(-)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 9 LEU A 215
VAL A 234
LEU A 239
ALA A 300
MET A 244
 None
 1.15A 5og9A-3gd9A:
undetectable		 5og9A-3gd9A:
22.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OG9_B_TESB502_1
(-)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		5 / 12 LEU A 215
VAL A 234
LEU A 239
ALA A 300
MET A 244
 None
 1.18A 5og9B-3gd9A:
undetectable		 5og9B-3gd9A:
22.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WM2_A_ACTA605_0
(SALICYLATE-AMP
LIGASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		3 / 3 THR A 294
THR A 293
ARG A 318
 None
 0.98A 5wm2A-3gd9A:
undetectable		 5wm2A-3gd9A:
23.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EQP_A_BUWA601_1
(CHOLINESTERASE)		 3gd9 LAMINARIPENTAOSE-PRO
DUCING
BETA-1,3-GULUASE
(LPHASE)
(Streptomyces
matensis) 		4 / 8 GLY A 372
GLN A 168
THR A 167
TYR A 232
 None
None
BGC  A   3 (-3.3A)
None
 1.12A 6eqpA-3gd9A:
undetectable		 6eqpA-3gd9A:
13.47