SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3gkb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_A_DVAA6_0
(GRAMICIDIN A)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		3 / 3 ALA A 125
VAL A 123
TRP A 186
 None
 1.01A 1gmkA-3gkbA:
undetectable
1gmkB-3gkbA:
undetectable		 1gmkA-3gkbA:
5.65
1gmkB-3gkbA:
5.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MJQ_B_SAMB200_0
(METHIONINE REPRESSOR)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 11 GLU A 234
GLY A 150
ARG A  39
LEU A  82
PRO A  87
 None
 1.47A 1mjqA-3gkbA:
undetectable
1mjqB-3gkbA:
undetectable		 1mjqA-3gkbA:
16.37
1mjqB-3gkbA:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_C_SAMC2293_0
(GLYCINE
N-METHYLTRANSFERASE)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 TYR A 199
ILE A 207
VAL A 106
ASP A 127
ALA A 131
 None
 1.28A 1nbhC-3gkbA:
undetectable		 1nbhC-3gkbA:
23.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZZ_A_ACTA421_0
(ACLACINOMYCIN-10-HYD
ROXYLASE)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		4 / 8 GLY A 258
GLY A 254
GLY A 253
LEU A 255
 None
 0.62A 1qzzA-3gkbA:
undetectable		 1qzzA-3gkbA:
23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YA3_B_STRB2001_2
(MINERALOCORTICOID
RECEPTOR)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		3 / 3 LEU A 271
LEU A 250
MET A  70
 None
 0.71A 1ya3B-3gkbA:
undetectable		 1ya3B-3gkbA:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZZM_A_SAMA401_0
(UNCHARACTERIZED
PROTEIN MJ0883)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 LEU A 268
GLY A 113
VAL A 109
LEU A  65
PHE A 122
 None
 1.02A 2zzmA-3gkbA:
undetectable		 2zzmA-3gkbA:
22.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G2O_A_SAMA500_1
(PCZA361.24)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		3 / 3 ARG A  71
GLU A 265
ASP A 267
 None
 0.77A 3g2oA-3gkbA:
undetectable		 3g2oA-3gkbA:
25.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3H52_D_486D2_1
(GLUCOCORTICOID
RECEPTOR)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 GLY A 139
VAL A 169
LEU A 144
ARG A 273
MET A  70
 None
 1.44A 3h52D-3gkbA:
undetectable		 3h52D-3gkbA:
20.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HM1_B_J3ZB1_1
(ESTROGEN RECEPTOR)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 11 LEU A 138
LEU A 175
GLU A 269
GLY A 153
LEU A 157
 None
 1.09A 3hm1B-3gkbA:
undetectable		 3hm1B-3gkbA:
23.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KU1_G_SAMG226_0
(SAM-DEPENDENT
METHYLTRANSFERASE)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 LEU A 111
GLY A 139
VAL A 170
ALA A 115
GLY A 119
 None
 1.14A 3ku1G-3gkbA:
undetectable		 3ku1G-3gkbA:
25.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q95_B_ESLB700_1
(ESTROGEN RECEPTOR)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 LEU A 138
LEU A 175
GLU A 269
GLY A 153
LEU A 157
 None
 1.04A 3q95B-3gkbA:
undetectable		 3q95B-3gkbA:
23.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R75_A_BEZA701_0
(ANTHRANILATE/PARA-AM
INOBENZOATE
SYNTHASES COMPONENT
I)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 ILE A 147
GLY A 150
GLU A 234
THR A 154
GLU A 121
 None
 0.89A 3r75A-3gkbA:
undetectable		 3r75A-3gkbA:
20.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R75_B_BEZB701_0
(ANTHRANILATE/PARA-AM
INOBENZOATE
SYNTHASES COMPONENT
I)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 ILE A 147
GLY A 150
GLU A 234
THR A 154
GLU A 121
 None
 0.92A 3r75B-3gkbA:
undetectable		 3r75B-3gkbA:
20.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R76_A_BEZA701_0
(ANTHRANILATE/PARA-AM
INOBENZOATE
SYNTHASES COMPONENT
I)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 11 ILE A 147
GLY A 150
GLU A 234
THR A 154
GLU A 121
 None
 0.88A 3r76A-3gkbA:
undetectable		 3r76A-3gkbA:
20.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R76_B_BEZB701_0
(ANTHRANILATE/PARA-AM
INOBENZOATE
SYNTHASES COMPONENT
I)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 11 ILE A 147
GLY A 150
GLU A 234
THR A 154
GLU A 121
 None
 0.87A 3r76B-3gkbA:
undetectable		 3r76B-3gkbA:
20.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VW1_B_CVIB301_0
(PUTATIVE REGULATORY
PROTEIN)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 LEU A   9
THR A 107
LEU A  42
PHE A 122
LEU A  65
 None
 1.15A 3vw1B-3gkbA:
undetectable		 3vw1B-3gkbA:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G0V_A_MIXA1301_1
(DNA TOPOISOMERASE
2-BETA)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		4 / 7 ARG A 101
GLY A  97
ASN A  91
GLN A 103
 GOL  A 286 (-4.4A)
None
None
None
 0.91A 4g0vA-3gkbA:
undetectable		 4g0vA-3gkbA:
17.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PXM_A_ESTA2000_1
(ESTROGEN RECEPTOR)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 12 LEU A 138
LEU A 175
GLU A 269
GLY A 153
LEU A 157
 None
 1.09A 4pxmA-3gkbA:
undetectable		 4pxmA-3gkbA:
22.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YJI_A_TYLA502_1
(ARYL ACYLAMIDASE)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		4 / 7 LEU A 268
GLY A 117
GLY A 118
ILE A  30
 None
 0.67A 4yjiA-3gkbA:
undetectable		 4yjiA-3gkbA:
21.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWZ_D_010D6_0
(N-[(5-METHYLISOXAZOL
-3-YL)CARBONYL]ALANY
L-L-VALYL-N~1~-((1R,
2Z)-4-(BENZYLOXY)-4-
OXO-1-{[(3R)-2-OXOPY
RROLIDIN-3-YL]METHYL
}BUT-2-ENYL)-L-LEUCI
NAMIDE
PEDV MAIN PROTEASE)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		3 / 3 MET A 145
HIS A  67
GLY A 254
 None
 0.82A 5gwzB-3gkbA:
undetectable		 5gwzB-3gkbA:
24.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YK2_A_ERYA501_0
(PROBABLE CONSERVED
ATP-BINDING PROTEIN
ABC TRANSPORTER)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		5 / 11 GLU A  14
ALA A 208
ALA A 204
ILE A 108
VAL A 106
 None
 1.17A 5yk2A-3gkbA:
undetectable		 5yk2A-3gkbA:
23.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DJZ_C_GMJC301_1
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)		 3gkb PUTATIVE ENOYL-COA
HYDRATASE
(Streptomyces
avermitilis) 		4 / 6 TRP A 186
LEU A 268
GLN A 155
GLU A 142
 None
 1.38A 6djzC-3gkbA:
undetectable		 6djzC-3gkbA:
21.45