SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3gqs'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PKV_A_RBFA100_1
(RIBOFLAVIN SYNTHASE
ALPHA CHAIN)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 11 SER A  67
LEU A  65
ILE A  53
THR A  26
ILE A  62
 None
 1.19A 1pkvA-3gqsA:
undetectable
1pkvB-3gqsA:
undetectable		 1pkvA-3gqsA:
22.43
1pkvB-3gqsA:
22.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PKV_B_RBFB101_1
(RIBOFLAVIN SYNTHASE
ALPHA CHAIN)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 11 ILE A  62
SER A  67
LEU A  65
ILE A  53
THR A  26
 None
 1.20A 1pkvA-3gqsA:
undetectable
1pkvB-3gqsA:
undetectable		 1pkvA-3gqsA:
22.43
1pkvB-3gqsA:
22.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R9V_B_DXCB1_0
(INVASIN IPAD)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 7 ILE A  45
LEU A  40
LEU A   7
HIS A  49
VAL A  60
 None
 1.41A 3r9vA-3gqsA:
undetectable
3r9vB-3gqsA:
undetectable		 3r9vA-3gqsA:
18.47
3r9vB-3gqsA:
18.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U7S_A_017A202_2
(POL POLYPROTEIN)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 9 ASP A  64
GLY A  66
GLY A  30
ILE A  28
VAL A  71
 None
 1.06A 3u7sB-3gqsA:
undetectable		 3u7sB-3gqsA:
25.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A9K_A_TYLA2200_1
(CREB-BINDING PROTEIN)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		4 / 6 VAL A  29
LEU A  40
ILE A  45
VAL A  90
 None
 0.95A 4a9kA-3gqsA:
undetectable		 4a9kA-3gqsA:
19.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VC0_A_RITA602_2
(CYTOCHROME P450 3A4)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		4 / 7 ILE A  45
LEU A   7
PHE A  19
THR A  26
 None
 1.01A 5vc0A-3gqsA:
undetectable		 5vc0A-3gqsA:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_A_C2FA3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 12 GLY A  70
VAL A   9
LEU A   7
GLY A  30
ILE A  45
 None
 1.15A 5vooA-3gqsA:
undetectable		 5vooA-3gqsA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_B_C2FB702_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 12 GLY A  70
VAL A   9
LEU A   7
GLY A  30
ILE A  45
 None
 1.14A 5vooB-3gqsA:
undetectable		 5vooB-3gqsA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_C_C2FC702_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 12 GLY A  70
VAL A   9
LEU A   7
GLY A  30
ILE A  45
 None
 1.16A 5vooC-3gqsA:
undetectable		 5vooC-3gqsA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_D_C2FD3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 12 GLY A  70
VAL A   9
LEU A   7
GLY A  30
ILE A  45
 None
 1.10A 5vooD-3gqsA:
undetectable		 5vooD-3gqsA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_E_C2FE3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 12 GLY A  70
VAL A   9
LEU A   7
GLY A  30
ILE A  45
 None
 1.17A 5vooE-3gqsA:
undetectable		 5vooE-3gqsA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_F_C2FF3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3gqs ADENYLATE
CYCLASE-LIKE PROTEIN
(Chlamydia
trachomatis) 		5 / 12 GLY A  70
VAL A   9
LEU A   7
GLY A  30
ILE A  45
 None
 1.17A 5vooF-3gqsA:
undetectable		 5vooF-3gqsA:
16.27