SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ih6'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D0V_A_NIOA991_1
(NICOTINATE
MONONUCLEOTIDE:5,6-D
IMETHYLBENZIMIDAZOLE
PHOSPHORIBOSYLTRANSF
ERASE)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
4 / 8 GLY A 342
PHE A 341
LEU A 313
ARG A 440
None
0.67A 1d0vA-3ih6A:
undetectable
1d0vA-3ih6A:
22.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JHA_A_NIOA991_1
(NICOTINATE
MONONUCLEOTIDE:5,6-D
IMETHYLBENZIMIDAZOLE
PHOSPHORIBOSYLTRANSF
ERASE)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
4 / 8 GLY A 342
PHE A 341
LEU A 313
ARG A 440
None
0.64A 1jhaA-3ih6A:
undetectable
1jhaA-3ih6A:
22.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT6_A_DVAA6_0
(GRAMICIDIN C)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
3 / 3 ALA A 290
VAL A 296
TRP A 382
None
0.75A 1nt6A-3ih6A:
undetectable
1nt6A-3ih6A:
11.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT6_B_DVAB6_0
(GRAMICIDIN C)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
3 / 3 ALA A 290
VAL A 296
TRP A 382
None
0.75A 1nt6B-3ih6A:
undetectable
1nt6B-3ih6A:
11.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IZQ_B_DVAB6_0
(GRAMICIDIN D)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
3 / 3 TRP A 382
ALA A 290
VAL A 296
None
0.78A 2izqA-3ih6A:
undetectable
2izqB-3ih6A:
undetectable
2izqA-3ih6A:
9.57
2izqB-3ih6A:
9.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2LBD_A_REAA500_1
(RETINOIC ACID
RECEPTOR GAMMA)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
5 / 12 PHE A 327
MET A 284
PHE A 329
SER A 255
GLY A 443
None
1.27A 2lbdA-3ih6A:
undetectable
2lbdA-3ih6A:
22.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2RK8_A_PPFA3969_1
(PHOSPHOENOLPYRUVATE
CARBOXYKINASE,
CYTOSOLIC [GTP])
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
4 / 8 ARG A 377
LYS A 381
SER A 310
ASP A 307
None
None
None
EDO  A 501 (-3.3A)
1.25A 2rk8A-3ih6A:
undetectable
2rk8A-3ih6A:
16.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCV_B_ASDB1224_1
(GLUTATHIONE
S-TRANSFERASE A3)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
4 / 6 LEU A 365
ALA A 301
LEU A 298
ALA A 339
None
0.96A 2vcvB-3ih6A:
undetectable
2vcvB-3ih6A:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z0Y_A_SAMA300_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0657)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
5 / 9 ALA A 343
VAL A 281
LEU A 317
LEU A 322
ALA A 354
None
0.79A 2z0yA-3ih6A:
undetectable
2z0yA-3ih6A:
26.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z0Y_B_SAMB400_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0657)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
5 / 9 ALA A 343
VAL A 281
LEU A 317
LEU A 322
ALA A 354
None
0.71A 2z0yB-3ih6A:
undetectable
2z0yB-3ih6A:
26.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_A_DVAA6_0
(GRAMICIDIN D)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
3 / 3 ALA A 290
VAL A 296
TRP A 382
None
0.80A 3l8lA-3ih6A:
undetectable
3l8lB-3ih6A:
undetectable
3l8lA-3ih6A:
9.57
3l8lB-3ih6A:
11.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WAN_C_ACTC303_0
(BRANCHPOINT-BRIDGING
PROTEIN)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
3 / 3 ASP A 426
ARG A 418
PRO A 293
None
0.93A 4wanC-3ih6A:
3.0
4wanC-3ih6A:
21.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z84_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3ih6 PUTATIVE ZINC
PROTEASE

(Bordetella
pertussis)
4 / 7 LEU A 365
PHE A 370
LEU A 305
PHE A 341
None
0.94A 5z84C-3ih6A:
undetectable
5z84J-3ih6A:
undetectable
5z84C-3ih6A:
21.89
5z84J-3ih6A:
15.31