SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3k1u'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FFY_A_MRCA1993_1
(ISOLEUCYL-TRNA
SYNTHETASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		5 / 12 HIS A 277
GLY A 259
ASN A 261
GLY A 197
ASP A 135
 TRS  A 801 (-4.5A)
None
None
TRS  A 801 ( 4.4A)
TRS  A 801 (-2.8A)
 1.23A 1ffyA-3k1uA:
undetectable		 1ffyA-3k1uA:
17.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ECP_A_ACRA992_1
(MALTODEXTRIN
PHOSPHORYLASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		5 / 10 TYR A 220
ASP A 217
ASP A  16
HIS A 277
HIS A 159
 TRS  A 801 (-4.6A)
None
TRS  A 801 (-3.0A)
TRS  A 801 (-4.5A)
None
 1.37A 2ecpA-3k1uA:
undetectable		 2ecpA-3k1uA:
16.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ECP_B_ACRB992_1
(MALTODEXTRIN
PHOSPHORYLASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		5 / 10 TYR A 220
ASP A 217
ASP A  16
HIS A 277
HIS A 159
 TRS  A 801 (-4.6A)
None
TRS  A 801 (-3.0A)
TRS  A 801 (-4.5A)
None
 1.37A 2ecpB-3k1uA:
undetectable		 2ecpB-3k1uA:
16.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NXE_A_SAMA302_1
(RIBOSOMAL PROTEIN
L11
METHYLTRANSFERASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		3 / 3 THR A  30
ASP A 135
SER A 212
 None
TRS  A 801 (-2.8A)
None
 0.84A 2nxeA-3k1uA:
undetectable		 2nxeA-3k1uA:
20.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NXE_B_SAMB303_1
(RIBOSOMAL PROTEIN
L11
METHYLTRANSFERASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		3 / 3 THR A  30
ASP A 135
SER A 212
 None
TRS  A 801 (-2.8A)
None
 0.85A 2nxeB-3k1uA:
undetectable		 2nxeB-3k1uA:
20.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A27_A_SAMA250_1
(UNCHARACTERIZED
PROTEIN MJ1557)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		3 / 3 MET A 104
GLU A  75
ASN A 261
 None
MG  A 409 (-3.1A)
None
 1.06A 3a27A-3k1uA:
undetectable		 3a27A-3k1uA:
21.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3D91_A_REMA350_1
(RENIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		5 / 12 GLY A 197
THR A 216
ASP A 135
SER A  32
ALA A  73
 TRS  A 801 ( 4.4A)
TRS  A 801 ( 4.9A)
TRS  A 801 (-2.8A)
TRS  A 801 ( 4.5A)
TRS  A 801 (-3.4A)
 1.10A 3d91A-3k1uA:
undetectable		 3d91A-3k1uA:
19.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JAY_A_SAMA1102_0
(STRUCTURAL PROTEIN
VP3)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		5 / 12 ILE A 274
PRO A 258
ALA A 278
PHE A 311
ILE A   6
 None
 1.11A 3jayA-3k1uA:
undetectable		 3jayA-3k1uA:
14.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JX1_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.19A 3jx1A-3k1uA:
undetectable
3jx1B-3k1uA:
undetectable		 3jx1A-3k1uA:
20.97
3jx1B-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N61_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 7 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.21A 3n61A-3k1uA:
undetectable
3n61B-3k1uA:
undetectable		 3n61A-3k1uA:
20.97
3n61B-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NLY_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.17A 3nlyA-3k1uA:
undetectable
3nlyB-3k1uA:
undetectable		 3nlyA-3k1uA:
20.97
3nlyB-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RAE_F_LFXF101_1
(DNA TOPOISOMERASE 4
SUBUNIT A
DNA TOPOISOMERASE 4
SUBUNIT B)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		3 / 4 SER A 242
GLY A 312
GLU A 252
 None
 0.66A 3raeA-3k1uA:
undetectable
3raeC-3k1uA:
undetectable		 3raeA-3k1uA:
22.73
3raeC-3k1uA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RAV_A_RAVA183_1
(FERRITIN LIGHT CHAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 6 LEU A 180
TYR A 211
ALA A 150
LEU A 225
 None
 1.08A 3ravA-3k1uA:
undetectable		 3ravA-3k1uA:
19.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RQL_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.19A 3rqlA-3k1uA:
undetectable
3rqlB-3k1uA:
undetectable		 3rqlA-3k1uA:
20.97
3rqlB-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4CAP_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.19A 4capA-3k1uA:
undetectable
4capB-3k1uA:
undetectable		 4capA-3k1uA:
20.97
4capB-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4D32_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.17A 4d32A-3k1uA:
undetectable
4d32B-3k1uA:
undetectable		 4d32A-3k1uA:
20.97
4d32B-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F93_B_SANB3004_1
(U5 SMALL NUCLEAR
RIBONUCLEOPROTEIN
200 KDA HELICASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 GLU A 121
GLU A  63
GLY A  65
SER A  64
 EDO  A 406 (-4.6A)
None
None
None
 0.99A 4f93B-3k1uA:
undetectable		 4f93B-3k1uA:
11.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V3Y_B_H4BB760_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 PHE A  29
GLU A  75
SER A 262
VAL A 275
 None
MG  A 409 (-3.1A)
None
None
 1.18A 4v3yA-3k1uA:
undetectable
4v3yB-3k1uA:
undetectable		 4v3yA-3k1uA:
20.97
4v3yB-3k1uA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XO7_B_ASDB402_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C2)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 7 TYR A 220
VAL A 194
ILE A 162
HIS A 277
 TRS  A 801 (-4.6A)
None
None
TRS  A 801 (-4.5A)
 1.21A 4xo7B-3k1uA:
undetectable		 4xo7B-3k1uA:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M45_A_ACTA803_0
(ACETONE CARBOXYLASE
ALPHA SUBUNIT)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 4 GLU A 184
PRO A 183
ILE A 189
LEU A 185
 EDO  A 404 (-2.7A)
None
None
None
 1.22A 5m45A-3k1uA:
undetectable		 5m45A-3k1uA:
16.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M45_D_ACTD803_0
(ACETONE CARBOXYLASE
ALPHA SUBUNIT)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 4 GLU A 184
PRO A 183
ILE A 189
LEU A 185
 EDO  A 404 (-2.7A)
None
None
None
 1.23A 5m45D-3k1uA:
undetectable		 5m45D-3k1uA:
16.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M45_G_ACTG803_0
(ACETONE CARBOXYLASE
ALPHA SUBUNIT)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 4 GLU A 184
PRO A 183
ILE A 189
LEU A 185
 EDO  A 404 (-2.7A)
None
None
None
 1.20A 5m45G-3k1uA:
undetectable		 5m45G-3k1uA:
16.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M45_J_ACTJ803_0
(ACETONE CARBOXYLASE
ALPHA SUBUNIT)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 4 GLU A 184
PRO A 183
ILE A 189
LEU A 185
 EDO  A 404 (-2.7A)
None
None
None
 1.24A 5m45J-3k1uA:
undetectable		 5m45J-3k1uA:
16.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NWW_A_ACAA18_2
(SCRFP-TAG,GP41)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		3 / 3 LYS A 190
TRP A 193
SER A 214
 EDO  A 405 (-2.7A)
EDO  A 403 ( 4.3A)
None
 1.27A 5nwwA-3k1uA:
undetectable		 5nwwA-3k1uA:
7.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TZO_B_7V7B201_2
(ENDO-1,4-BETA-XYLANA
SE A)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		3 / 3 ARG A 279
PRO A 288
TYR A 220
 None
None
TRS  A 801 (-4.6A)
 1.02A 5tzoB-3k1uA:
undetectable		 5tzoB-3k1uA:
18.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UO7_A_H4BA802_1
(NITRIC OXIDE
SYNTHASE, BRAIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 SER A 262
VAL A 275
PHE A  29
GLU A  75
 None
None
None
MG  A 409 (-3.1A)
 1.11A 5uo7A-3k1uA:
undetectable
5uo7B-3k1uA:
undetectable		 5uo7A-3k1uA:
21.02
5uo7B-3k1uA:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6HZP_A_FVTA501_0
(PEPTIDE ABC
TRANSPORTER PERMEASE)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 8 GLN A 299
ASN A   8
PRO A   9
ILE A  10
 None
 0.81A 6hzpA-3k1uA:
undetectable		 6hzpA-3k1uA:
21.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MVX_A_K4DA1304_0
(ION TRANSPORT
PROTEIN)		 3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE
(Clostridium
acetobutylicum) 		4 / 6 LEU A 201
MET A  18
THR A 137
LEU A 225
 None
 1.15A 6mvxA-3k1uA:
undetectable
6mvxB-3k1uA:
undetectable
6mvxC-3k1uA:
undetectable		 6mvxA-3k1uA:
23.51
6mvxB-3k1uA:
23.51
6mvxC-3k1uA:
23.51