SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3k3n'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A4L_C_DCFC1353_2
(ADENOSINE DEAMINASE)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 5 LEU A 429
LEU A 433
LEU A 393
GLY A 372
None
0.87A 1a4lC-3k3nA:
undetectable
1a4lC-3k3nA:
23.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CMA_A_SAMA105_0
(PROTEIN (MET
REPRESSOR))
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 8 GLU A 436
ARG A 383
ARG A 380
LEU A 376
None
1.07A 1cmaA-3k3nA:
undetectable
1cmaB-3k3nA:
undetectable
1cmaA-3k3nA:
14.63
1cmaB-3k3nA:
14.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYU_B_SAMB201_0
(PUTATIVE RIBOSOMAL
RNA
METHYLTRANSFERASE 2)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 12 SER A 337
GLY A 372
GLY A 397
VAL A 424
THR A 423
None
1.06A 2nyuB-3k3nA:
undetectable
2nyuB-3k3nA:
21.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZS9_A_PAUA603_0
(PANTOTHENATE KINASE)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 6 ASP A 249
HIS A 319
TYR A 257
ASN A 189
FE2  A   1 (-2.5A)
FE2  A   1 (-3.3A)
None
None
1.10A 2zs9A-3k3nA:
undetectable
2zs9A-3k3nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B9L_A_AZZA1010_1
(SERUM ALBUMIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 8 LEU A 276
ILE A 318
PHE A 246
GLY A 294
None
0.88A 3b9lA-3k3nA:
2.2
3b9lA-3k3nA:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_B_SVRB501_1
(PHOSPHOLIPASE A2)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 4 SER A 139
PRO A 140
PHE A 142
PRO A 138
None
1.48A 3bjwA-3k3nA:
0.0
3bjwA-3k3nA:
18.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_B_TA1B502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gB-3k3nA:
undetectable
3j6gB-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_D_TA1D502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gD-3k3nA:
undetectable
3j6gD-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_F_TA1F502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gF-3k3nA:
undetectable
3j6gF-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_H_TA1H502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gH-3k3nA:
undetectable
3j6gH-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_J_TA1J502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gJ-3k3nA:
undetectable
3j6gJ-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_L_TA1L502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gL-3k3nA:
undetectable
3j6gL-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_N_TA1N502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gN-3k3nA:
undetectable
3j6gN-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_P_TA1P502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gP-3k3nA:
undetectable
3j6gP-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_R_TA1R502_1
(TUBULIN BETA CHAIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 VAL A 147
ASP A 146
LEU A 236
THR A 310
LEU A 137
None
1.06A 3j6gR-3k3nA:
undetectable
3j6gR-3k3nA:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K8M_A_ACRA720_1
(ALPHA-AMYLASE, SUSG)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 7 TYR A 370
GLU A 222
TRP A 220
ASN A 363
None
1.29A 3k8mA-3k3nA:
undetectable
3k8mA-3k3nA:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KCX_A_CQLA1_0
(HYPOXIA-INDUCIBLE
FACTOR 1-ALPHA
INHIBITOR)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 10 LEU A 236
HIS A 247
ASP A 249
ILE A 313
HIS A 319
None
FE2  A   1 (-3.4A)
FE2  A   1 (-2.5A)
None
FE2  A   1 (-3.3A)
0.72A 3kcxA-3k3nA:
17.5
3kcxA-3k3nA:
22.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KCX_A_CQLA1_0
(HYPOXIA-INDUCIBLE
FACTOR 1-ALPHA
INHIBITOR)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
6 / 10 THR A 244
HIS A 247
ASP A 249
LYS A 264
ILE A 313
HIS A 319
None
FE2  A   1 (-3.4A)
FE2  A   1 (-2.5A)
None
None
FE2  A   1 (-3.3A)
1.00A 3kcxA-3k3nA:
17.5
3kcxA-3k3nA:
22.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YJI_A_TYLA502_1
(ARYL ACYLAMIDASE)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 7 GLY A 396
GLY A 397
ALA A 399
ILE A 437
None
0.70A 4yjiA-3k3nA:
undetectable
4yjiA-3k3nA:
20.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HPU_A_IPHA101_0
(INSULIN, CHAIN A
INSULIN, CHAIN B)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
4 / 4 CYH A 368
LEU A 344
LEU A 400
ALA A 399
None
1.02A 5hpuA-3k3nA:
undetectable
5hpuB-3k3nA:
undetectable
5hpuA-3k3nA:
5.29
5hpuB-3k3nA:
5.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ECT_A_SAMA1300_0
(STIE PROTEIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 12 GLY A 108
GLY A 132
ILE A 209
VAL A 127
ILE A 125
None
0.88A 6ectA-3k3nA:
undetectable
6ectA-3k3nA:
22.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ECX_A_SAMA1301_0
(STIE PROTEIN)
3k3n PHD FINGER PROTEIN 8
(Homo
sapiens)
5 / 12 GLY A 108
GLY A 132
ILE A 209
VAL A 127
ILE A 125
None
0.85A 6ecxA-3k3nA:
undetectable
6ecxA-3k3nA:
22.08