SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3kdn'
List of Similar Pattern of Amino Acids| DrReposER ID / Desc. | Hit PDBID |
Hit Macromolecule |
Res. Matches |
Interface | HETATM | RMSD | Dali Z-score |
Seq. Identity (%) |
View | Dock | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1N13_B_AG2B7011_1 (PYRUVOYL-DEPENDENTARGININEDECARBOXYLASE ALPHACHAINPYRUVOYL-DEPENDENTARGININEDECARBOXYLASE BETACHAIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | ARG A 155LEU A 181ASP A 186LEU A 150 | None | 1.27A | 1n13B-3kdnA:undetectable1n13C-3kdnA:undetectable | 1n13B-3kdnA:14.551n13C-3kdnA:7.82 | |||
| 2BXE_A_1FLA2002_1 (SERUM ALBUMIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 10 | ALA A 109LEU A 123ALA A 27LEU A 301VAL A 300 | None | 1.17A | 2bxeA-3kdnA:undetectable | 2bxeA-3kdnA:21.43 | |||
| 2BXE_B_1FLB2003_1 (SERUM ALBUMIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 10 | TYR A 91LEU A 304LEU A 126LEU A 123ILE A 296 | None | 1.08A | 2bxeB-3kdnA:undetectable | 2bxeB-3kdnA:21.43 | |||
| 2BXG_A_IBPA2002_1 (SERUM ALBUMIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 8 | ALA A 109ALA A 27LEU A 301VAL A 300 | None | 0.90A | 2bxgA-3kdnA:undetectable | 2bxgA-3kdnA:21.43 | |||
| 2F16_N_BO2N1404_1 (PROTEASOME COMPONENTPRE3) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 11 | THR A 317ALA A 318ARG A 338ALA A 334SER A 367 | NoneNoneNoneNoneCAP A 600 (-2.5A) | 1.22A | 2f16N-3kdnA:undetectable | 2f16N-3kdnA:20.69 | |||
| 2FXE_A_DR7A102_1 (POL PROTEIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | ALA A 361GLY A 138GLY A 309ILE A 310VAL A 146 | None | 0.85A | 2fxeA-3kdnA:undetectable | 2fxeA-3kdnA:14.86 | |||
| 2JC9_A_ADNA1497_1 (CYTOSOLIC PURINE5'-NUCLEOTIDASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 7 | ARG A 268ASP A 273ILE A 278PHE A 141 | None | 0.91A | 2jc9A-3kdnA:undetectable | 2jc9A-3kdnA:21.61 | |||
| 2XRZ_A_ACTA1470_0 (DEOXYRIBODIPYRIMIDINE PHOTOLYASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | ARG A 240ALA A 232ASP A 233GLU A 236 | None | 1.25A | 2xrzA-3kdnA:undetectable | 2xrzA-3kdnA:22.05 | |||
| 2YFB_A_ACTA501_0 (METHYL-ACCEPTINGCHEMOTAXISTRANSDUCER) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 7 | ASP A 186VAL A 408ARG A 409ILE A 412 | None | 0.75A | 2yfbA-3kdnA:undetectable | 2yfbA-3kdnA:19.00 | |||
| 3BJW_A_SVRA508_1 (PHOSPHOLIPASE A2) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | VAL A 349GLN A 332PHE A 29ARG A 335 | None | 1.48A | 3bjwE-3kdnA:undetectable | 3bjwE-3kdnA:13.24 | |||
| 3BJW_C_SVRC505_2 (PHOSPHOLIPASE A2) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | VAL A 349GLN A 332PHE A 29ARG A 335 | None | 1.37A | 3bjwH-3kdnA:undetectable | 3bjwH-3kdnA:13.24 | |||
| 3CYX_A_ROCA201_4 (HIV-1 PROTEASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 4 | LEU A 370ASP A 191VAL A 160THR A 394 | None MG A 500 ( 3.0A)NoneNone | 1.22A | 3cyxB-3kdnA:undetectable | 3cyxB-3kdnA:13.85 | |||
| 3HRD_B_NIOB5661_1 (NICOTINATEDEHYDROGENASE LARGEMOLYBDOPTERINSUBUNITNICOTINATEDEHYDROGENASE MEDIUMMOLYBDOPTERINSUBUNIT) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 8 | ILE A 89ALA A 72THR A 52ALA A 95 | None | 0.89A | 3hrdA-3kdnA:undetectable3hrdB-3kdnA:undetectable | 3hrdA-3kdnA:21.903hrdB-3kdnA:22.52 | |||
| 3JZJ_A_ACRA405_1 (ACARBOSE/MALTOSEBINDING PROTEIN GACH) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | GLU A 192GLY A 392ALA A 320GLY A 316ASN A 374 | MG A 500 ( 2.5A)CAP A 600 (-3.8A)NoneNoneNone | 1.22A | 3jzjA-3kdnA:undetectable | 3jzjA-3kdnA:22.20 | |||
| 3NDI_A_SAMA601_0 (METHYLTRANSFERASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | GLU A 49ILE A 112PHE A 113ALA A 48ILE A 108 | None | 1.35A | 3ndiA-3kdnA:undetectable | 3ndiA-3kdnA:22.92 | |||
| 3QXY_A_SAMA6734_0 (N-LYSINEMETHYLTRANSFERASESETD6) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | ALA A 43GLY A 44TYR A 12ALA A 27TYR A 91 | None | 1.04A | 3qxyA-3kdnA:undetectable | 3qxyA-3kdnA:21.95 | |||
| 3QXY_B_SAMB6735_0 (N-LYSINEMETHYLTRANSFERASESETD6TRANSCRIPTION FACTORP65) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 11 | ALA A 43GLY A 44TYR A 12ALA A 27TYR A 91 | None | 1.01A | 3qxyB-3kdnA:undetectable3qxyQ-3kdnA:undetectable | 3qxyB-3kdnA:21.953qxyQ-3kdnA:3.82 | |||
| 3RC0_A_SAMA484_0 (N-LYSINEMETHYLTRANSFERASESETD6) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 11 | ALA A 43GLY A 44TYR A 12ALA A 27TYR A 91 | None | 1.06A | 3rc0A-3kdnA:undetectable | 3rc0A-3kdnA:21.95 | |||
| 3RC0_B_SAMB480_0 (N-LYSINEMETHYLTRANSFERASESETD6) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | ALA A 43GLY A 44TYR A 12ALA A 27TYR A 91 | None | 0.99A | 3rc0B-3kdnA:undetectable | 3rc0B-3kdnA:21.95 | |||
| 3RF4_A_FUNA201_1 (MACROPHAGE MIGRATIONINHIBITORY FACTOR) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 11 | ILE A 39VAL A 87PHE A 29VAL A 31ILE A 89 | None | 1.37A | 3rf4A-3kdnA:undetectable3rf4C-3kdnA:undetectable | 3rf4A-3kdnA:13.463rf4C-3kdnA:13.46 | |||
| 3SI7_A_ACTA5_0 (CYSTIC FIBROSISTRANSMEMBRANECONDUCTANCEREGULATOR) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 3 / 3 | LYS A 163SER A 367GLN A 389 | CAP A 600 (-3.0A)CAP A 600 (-2.5A)CAP A 600 (-3.4A) | 0.79A | 3si7A-3kdnA:undetectable | 3si7A-3kdnA:21.21 | |||
| 3UG8_A_IMNA2001_2 (ALDO-KETO REDUCTASEFAMILY 1 MEMBER C3) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 3 / 3 | TYR A 357GLU A 339TYR A 342 | None | 1.00A | 3ug8A-3kdnA:11.6 | 3ug8A-3kdnA:21.44 | |||
| 3WRI_A_CAMA502_0 (CAMPHOR5-MONOOXYGENASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | GLY A 368THR A 317ILE A 375VAL A 378 | CAP A 600 (-3.3A)NoneNoneNone | 0.89A | 3wriA-3kdnA:undetectable | 3wriA-3kdnA:21.95 | |||
| 3WRI_B_CAMB502_0 (CAMPHOR5-MONOOXYGENASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | GLY A 368THR A 317ILE A 375VAL A 378 | CAP A 600 (-3.3A)NoneNoneNone | 0.89A | 3wriB-3kdnA:undetectable | 3wriB-3kdnA:21.95 | |||
| 4DRJ_A_RAPA201_2 (PEPTIDYL-PROLYLCIS-TRANS ISOMERASEFKBP4SERINE/THREONINE-PROTEIN KINASE MTOR) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 8 | LEU A 132PHE A 356ASP A 125TYR A 127 | None | 1.01A | 4drjB-3kdnA:undetectable | 4drjB-3kdnA:14.39 | |||
| 4L6V_A_PQNA2001_1 (PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A1FUSION PROTEIN OFPHOTOSYSTEM ISUBUNIT III ANDSUBUNIT IX) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 9 | TRP A 261ALA A 109LEU A 105GLY A 103ALA A 362 | None | 1.19A | 4l6va-3kdnA:undetectable4l6vf-3kdnA:undetectable | 4l6va-3kdnA:22.084l6vf-3kdnA:14.41 | |||
| 4N48_A_SAMA601_1 (CAP-SPECIFIC MRNA(NUCLEOSIDE-2'-O-)-METHYLTRANSFERASE 1) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 5 | ALA A 140GLY A 138ASP A 255ASP A 311 | None | 0.95A | 4n48A-3kdnA:undetectable | 4n48A-3kdnA:23.53 | |||
| 4QC6_B_KANB201_2 (BIFUNCTIONAL AAC/APH) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 3 / 3 | LEU A 270ASP A 273TYR A 274 | None | 0.47A | 4qc6B-3kdnA:undetectable | 4qc6B-3kdnA:17.23 | |||
| 4R29_D_SAMD301_1 (UNCHARACTERIZEDPROTEIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 3 / 3 | ARG A 205GLU A 192TYR A 168 | None MG A 500 ( 2.5A)None | 0.96A | 4r29D-3kdnA:undetectable | 4r29D-3kdnA:18.39 | |||
| 4RKU_A_PQNA5001_1 (PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A1PHOTOSYSTEM IREACTION CENTERSUBUNIT IX) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 8 | ARG A 338ALA A 334LEU A 337PHE A 113 | None | 1.00A | 4rkuA-3kdnA:undetectable4rkuJ-3kdnA:undetectable | 4rkuA-3kdnA:21.414rkuJ-3kdnA:6.64 | |||
| 4ZE0_A_VORA602_1 (LANOSTEROL 14-ALPHADEMETHYLASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 9 | THR A 289PHE A 288ILE A 296LEU A 313LEU A 337 | None | 1.06A | 4ze0A-3kdnA:undetectable | 4ze0A-3kdnA:22.97 | |||
| 5DZK_2_BEZ2801_0 (ATP-DEPENDENT CLPPROTEASE PROTEOLYTICSUBUNIT 1BEZ-LEU-LEU) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 4 | LEU A 388ARG A 147ILE A 157ILE A 152 | None | 0.94A | 5dzk2-3kdnA:undetectable5dzkM-3kdnA:1.15dzkN-3kdnA:1.1 | 5dzk2-3kdnA:1.905dzkM-3kdnA:19.385dzkN-3kdnA:19.38 | |||
| 5DZK_V_BEZV801_0 (ATP-DEPENDENT CLPPROTEASE PROTEOLYTICSUBUNIT 1BEZ-LEU-LEU) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 4 | ILE A 157ILE A 152ARG A 147LEU A 388 | None | 1.11A | 5dzkh-3kdnA:1.15dzkn-3kdnA:1.15dzkv-3kdnA:undetectable | 5dzkh-3kdnA:19.385dzkn-3kdnA:19.385dzkv-3kdnA:1.90 | |||
| 5KPC_A_SAMA401_0 (PAVINEN-METHYLTRANSFERASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | GLY A 373LEU A 390VAL A 408ALA A 407ALA A 425 | None | 0.96A | 5kpcA-3kdnA:undetectable | 5kpcA-3kdnA:20.90 | |||
| 5N0R_A_SAMA501_0 (PEPTIDEN-METHYLTRANSFERASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | ILE A 278GLY A 280HIS A 281VAL A 257ALA A 271 | NoneNoneCAP A 600 (-4.1A)NoneNone | 1.03A | 5n0rA-3kdnA:undetectable | 5n0rA-3kdnA:23.75 | |||
| 5N0T_A_SAMA501_0 (PEPTIDEN-METHYLTRANSFERASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | ILE A 278GLY A 280HIS A 281VAL A 257ALA A 271 | NoneNoneCAP A 600 (-4.1A)NoneNone | 1.04A | 5n0tA-3kdnA:undetectable | 5n0tA-3kdnA:23.95 | |||
| 5N0T_B_SAMB501_0 (PEPTIDEN-METHYLTRANSFERASE) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 12 | ILE A 278GLY A 280HIS A 281VAL A 257ALA A 271 | NoneNoneCAP A 600 (-4.1A)NoneNone | 1.06A | 5n0tB-3kdnA:undetectable | 5n0tB-3kdnA:23.95 | |||
| 5NFP_A_8W5A804_2 (GLUCOCORTICOIDRECEPTOR) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 4 | LEU A 304MET A 298ILE A 359LEU A 337 | None | 1.35A | 5nfpA-3kdnA:undetectable | 5nfpA-3kdnA:19.46 | |||
| 6EBZ_C_DAHC123_0 (RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE,BETA SUBUNIT) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 5 / 11 | SER A 107GLY A 110ILE A 112PHE A 113ILE A 89 | None | 0.98A | 6ebzC-3kdnA:undetectable | 6ebzC-3kdnA:11.26 | |||
| 6MDQ_A_TESA604_0 (SERUM ALBUMIN) |
3kdn | RIBULOSEBISPHOSPHATECARBOXYLASE (Thermococcuskodakarensis) | 4 / 8 | GLY A 383LEU A 382ALA A 334GLU A 339 | None | 0.65A | 6mdqA-3kdnA:undetectable | 6mdqA-3kdnA:11.74 |