SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3kfl'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_C_DVAC6_0
(GRAMICIDIN A)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 ALA A 695
VAL A 698
TRP A 596
None
0.86A 1av2C-3kflA:
undetectable
1av2D-3kflA:
undetectable
1av2C-3kflA:
4.38
1av2D-3kflA:
4.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FFY_A_MRCA1993_1
(ISOLEUCYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 HIS A 225
GLY A 227
GLY A 484
ASP A 486
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.6A)
0.80A 1ffyA-3kflA:
21.6
1ffyA-3kflA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FFY_A_MRCA1993_1
(ISOLEUCYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 HIS A 228
GLY A 227
GLY A 484
ASP A 486
HIS A 513
POP  A 802 ( 3.8A)
ME8  A 801 (-3.4A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.6A)
1.05A 1ffyA-3kflA:
21.6
1ffyA-3kflA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1IWH_A_PEMA501_1
(HEMOGLOBIN ALPHA
CHAIN)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 6 LYS A 690
ASP A 694
ALA A 695
LEU A 723
None
EDO  A 816 (-4.4A)
None
None
0.39A 1iwhA-3kflA:
undetectable
1iwhA-3kflA:
13.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT2_A_SAMA301_1
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 THR A 367
GLU A 337
ASP A 445
None
0.86A 1nt2A-3kflA:
2.7
1nt2A-3kflA:
18.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT5_A_DVAA6_0
(GRAMICIDIN A)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 ALA A 695
VAL A 698
TRP A 596
None
0.78A 1nt5A-3kflA:
undetectable
1nt5A-3kflA:
4.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT5_B_DVAB6_0
(GRAMICIDIN A)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 ALA A 695
VAL A 698
TRP A 596
None
0.78A 1nt5B-3kflA:
undetectable
1nt5B-3kflA:
4.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PG2_A_ADNA552_1
(METHIONYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
7 / 11 HIS A 225
GLY A 227
HIS A 228
GLY A 484
ASP A 486
ILE A 487
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.0A)
ME8  A 801 (-4.6A)
0.66A 1pg2A-3kflA:
35.5
1pg2A-3kflA:
26.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QU2_A_MRCA1993_1
(ISOLEUCYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
6 / 12 HIS A 225
GLY A 227
HIS A 228
GLY A 484
ASP A 486
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.6A)
0.83A 1qu2A-3kflA:
21.7
1qu2A-3kflA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QU2_A_MRCA1993_1
(ISOLEUCYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 HIS A 228
GLY A 227
GLY A 484
ASP A 486
HIS A 513
POP  A 802 ( 3.8A)
ME8  A 801 (-3.4A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.6A)
1.05A 1qu2A-3kflA:
21.7
1qu2A-3kflA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QU3_A_MRCA993_1
(ISOLEUCYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 HIS A 225
GLY A 227
HIS A 228
ASP A 486
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.6A)
1.04A 1qu3A-3kflA:
16.0
1qu3A-3kflA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZR_B_CDXB901_1
(DNA TOPOISOMERASE II)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 7 HIS A 470
TYR A 451
ASN A 449
LEU A 309
None
None
ME8  A 801 (-4.6A)
None
1.13A 1qzrA-3kflA:
undetectable
1qzrA-3kflA:
21.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W5U_C_DVAC6_0
(GRAMICIDIN D)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 ALA A 695
VAL A 698
TRP A 596
None
0.82A 1w5uC-3kflA:
undetectable
1w5uD-3kflA:
undetectable
1w5uC-3kflA:
4.38
1w5uD-3kflA:
4.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2G72_B_SAMB2002_0
(PHENYLETHANOLAMINE
N-METHYLTRANSFERASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 GLN A 682
PHE A 711
LEU A 613
ILE A 713
VAL A 714
None
1.30A 2g72B-3kflA:
2.2
2g72B-3kflA:
18.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HRC_B_CHDB1603_0
(FERROCHELATASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 5 MET A 500
ARG A 382
LEU A 413
PRO A 507
None
None
FMT  A 822 (-4.5A)
None
1.37A 2hrcB-3kflA:
0.0
2hrcB-3kflA:
19.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IZQ_B_DVAB6_0
(GRAMICIDIN D)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 TRP A 596
ALA A 695
VAL A 698
None
0.83A 2izqA-3kflA:
undetectable
2izqB-3kflA:
undetectable
2izqA-3kflA:
4.38
2izqB-3kflA:
4.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QEO_A_LNRA200_1
(D7R4 PROTEIN)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 TYR A 218
HIS A 491
ILE A 487
VAL A 483
MET A 295
ME8  A 801 (-4.7A)
ME8  A 801 (-4.6A)
ME8  A 801 (-4.0A)
None
None
1.00A 2qeoA-3kflA:
undetectable
2qeoA-3kflA:
13.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VL2_B_BEZB1162_0
(PEROXIREDOXIN-5)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 7 THR A 215
PRO A 216
PHE A 288
THR A 255
None
ME8  A 801 (-4.4A)
None
None
0.98A 2vl2B-3kflA:
3.4
2vl2B-3kflA:
17.22
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X1L_A_ADNA601_1
(METHIONYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
7 / 11 HIS A 225
GLY A 227
HIS A 228
GLY A 484
ASP A 486
ILE A 487
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.0A)
ME8  A 801 (-4.6A)
0.52A 2x1lA-3kflA:
45.3
2x1lA-3kflA:
41.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X1L_B_ADNB601_1
(METHIONYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
7 / 12 HIS A 225
GLY A 227
HIS A 228
GLY A 484
ASP A 486
ILE A 487
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.0A)
ME8  A 801 (-4.6A)
0.50A 2x1lB-3kflA:
43.3
2x1lB-3kflA:
41.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X1L_C_ADNC601_1
(METHIONYL-TRNA
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
7 / 11 HIS A 225
GLY A 227
HIS A 228
GLY A 484
ASP A 486
ILE A 487
HIS A 513
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
ME8  A 801 (-3.2A)
ME8  A 801 ( 2.6A)
ME8  A 801 (-4.0A)
ME8  A 801 (-4.6A)
0.50A 2x1lC-3kflA:
43.0
2x1lC-3kflA:
41.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ADX_A_IMNA2_2
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 7 ILE A 713
ILE A 692
LEU A 710
PHE A 711
LEU A 643
None
1.30A 3adxA-3kflA:
undetectable
3adxA-3kflA:
20.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HEC_A_STIA1_2
(MITOGEN-ACTIVATED
PROTEIN KINASE 14)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 4 LEU A 574
MET A 693
ILE A 629
ASP A 236
None
1.49A 3hecA-3kflA:
undetectable
3hecA-3kflA:
21.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_C_DVAC6_0
(GRAMICIDIN D)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 ALA A 695
VAL A 698
TRP A 596
None
0.74A 3l8lC-3kflA:
undetectable
3l8lD-3kflA:
undetectable
3l8lC-3kflA:
4.38
3l8lD-3kflA:
3.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3REQ_A_ADNA801_1
(METHYLMALONYL-COA
MUTASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 4 TYR A 602
TYR A 668
GLU A 672
GLY A 712
None
1.15A 3reqA-3kflA:
2.5
3reqA-3kflA:
22.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UZZ_B_ASDB501_1
(3-OXO-5-BETA-STEROID
4-DEHYDROGENASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 8 TYR A 450
HIS A 306
TRP A 495
LEU A 444
ME8  A 801 (-4.7A)
None
None
None
1.38A 3uzzB-3kflA:
undetectable
3uzzB-3kflA:
21.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FN9_B_STRB301_1
(STEROID RECEPTOR 2)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 LEU A 570
ASN A 571
LEU A 574
ALA A 575
THR A 734
None
1.21A 4fn9B-3kflA:
undetectable
4fn9B-3kflA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FOX_C_D16C301_1
(THYMIDYLATE SYNTHASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 11 HIS A 364
SER A 335
GLU A 337
LEU A 416
LEU A 340
EDO  A 811 (-4.4A)
POP  A 802 ( 4.2A)
None
EDO  A 814 ( 4.4A)
None
1.47A 4foxC-3kflA:
undetectable
4foxC-3kflA:
20.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IG1_A_ACTA504_0
(FAD:PROTEIN FMN
TRANSFERASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 5 SER A 512
ARG A 401
LEU A 488
ASP A 486
None
None
EDO  A 815 (-4.5A)
ME8  A 801 ( 2.6A)
1.32A 4ig1A-3kflA:
undetectable
4ig1A-3kflA:
21.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V2Z_B_Y70B151_1
(CEREBLON ISOFORM 4)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 8 PRO A 699
MET A 693
TRP A 596
TYR A 668
None
1.23A 4v2zB-3kflA:
undetectable
4v2zB-3kflA:
13.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V30_B_LVYB151_1
(CEREBLON ISOFORM 4)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 8 PRO A 699
MET A 693
TRP A 596
TYR A 668
None
1.26A 4v30B-3kflA:
undetectable
4v30B-3kflA:
13.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTG_E_LFXE101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
GGTCATGAATGACTATGCAC
GTAA)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 6 ALA A 635
ARG A 675
GLY A 673
GLU A 672
FMT  A 823 ( 3.7A)
None
None
None
0.95A 5btgA-3kflA:
undetectable
5btgB-3kflA:
undetectable
5btgC-3kflA:
undetectable
5btgA-3kflA:
21.73
5btgB-3kflA:
19.85
5btgC-3kflA:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HG0_B_SAMB301_0
(PANTOTHENATE
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 HIS A 225
GLY A 227
HIS A 228
VAL A 442
ASP A 486
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
None
ME8  A 801 ( 2.6A)
0.96A 5hg0B-3kflA:
7.5
5hg0B-3kflA:
19.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HG0_B_SAMB301_0
(PANTOTHENATE
SYNTHETASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 HIS A 225
GLY A 227
HIS A 228
VAL A 442
GLY A 484
POP  A 802 ( 4.0A)
ME8  A 801 (-3.4A)
POP  A 802 ( 3.8A)
None
ME8  A 801 (-3.2A)
0.67A 5hg0B-3kflA:
7.5
5hg0B-3kflA:
19.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HWA_A_GCSA302_1
(CHITOSANASE)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
4 / 7 THR A 301
ASP A 256
ASP A 445
GLY A 259
None
ME8  A 801 (-3.7A)
None
None
0.78A 5hwaA-3kflA:
undetectable
5hwaA-3kflA:
18.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C06_D_FI8D1404_1
(DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA')
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
3 / 3 ARG A 300
LYS A 285
ARG A 243
EDO  A 817 ( 4.0A)
EDO  A 817 (-4.1A)
EDO  A 813 (-4.0A)
1.35A 6c06D-3kflA:
2.1
6c06D-3kflA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6J20_A_GBQA1201_0
(SUBSTANCE-P
RECEPTOR,ENDOLYSIN)
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major)
5 / 12 ASN A 221
ILE A 487
TYR A 450
THR A 253
PHE A 284
POP  A 802 (-3.3A)
ME8  A 801 (-4.0A)
ME8  A 801 (-4.7A)
None
None
1.46A 6j20A-3kflA:
undetectable
6j20A-3kflA:
20.58