SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3knv'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EKJ_B_CUB4_0
(BETA-CARBONIC
ANHYDRASE)		 3knv TNF
RECEPTOR-ASSOCIATED
FACTOR 2
(Homo
sapiens) 		4 / 6 CYH A 129
CYH A 107
PRO A 108
SER A 109
 ZN  A 203 (-2.3A)
ZN  A 203 (-2.4A)
None
ZN  A 203 ( 4.1A)
 0.86A 1ekjA-3knvA:
undetectable
1ekjB-3knvA:
undetectable		 1ekjA-3knvA:
20.55
1ekjB-3knvA:
20.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q6U_A_BEZA501_0
(NIKD PROTEIN)		 3knv TNF
RECEPTOR-ASSOCIATED
FACTOR 2
(Homo
sapiens) 		4 / 7 ARG A  43
GLU A 122
PHE A  19
TYR A 121
 None
 1.46A 2q6uA-3knvA:
undetectable		 2q6uA-3knvA:
16.96