SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ks4'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BU8_A_TF4A1379_1
(PYRUVATE
DEHYDROGENASE KINASE
ISOENZYME 2)
3ks4 POLYMERASE COFACTOR
VP35

(Reston
ebolavirus)
4 / 8 LEU A 231
ILE A 309
ILE A 235
ILE A 238
None
0.82A 2bu8A-3ks4A:
undetectable
2bu8A-3ks4A:
21.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6G2P_A_TRPA502_0
(FLAVIN-DEPENDENT
L-TRYPTOPHAN OXIDASE
VIOA)
3ks4 POLYMERASE COFACTOR
VP35

(Reston
ebolavirus)
4 / 7 ARG A 301
LEU A 231
VAL A 314
TRP A 313
None
1.28A 6g2pA-3ks4A:
undetectable
6g2pA-3ks4A:
18.55