SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ldb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NOD_B_H4BB902_1
(NITRIC OXIDE
SYNTHASE)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 ARG C  98
ILE C  37
TRP C  47
 None
 1.15A 2nodB-3ldbC:
undetectable		 2nodB-3ldbC:
20.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QGJ_A_ACTA301_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 VAL C 143
VAL C 190
GLN C 198
 None
 0.66A 5qgjA-3ldbC:
undetectable		 5qgjA-3ldbC:
23.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QGM_A_ACTA301_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 VAL C 143
VAL C 190
GLN C 198
 None
 0.65A 5qgmA-3ldbC:
undetectable		 5qgmA-3ldbC:
23.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QGU_A_ACTA301_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 VAL C 143
VAL C 190
GLN C 198
 None
 0.72A 5qguA-3ldbC:
undetectable		 5qguA-3ldbC:
23.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QH9_A_ACTA301_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 VAL C 143
VAL C 190
GLN C 198
 None
 0.71A 5qh9A-3ldbC:
undetectable		 5qh9A-3ldbC:
23.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QHC_A_ACTA301_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 VAL C 143
VAL C 190
GLN C 198
 None
 0.70A 5qhcA-3ldbC:
undetectable		 5qhcA-3ldbC:
23.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QHE_A_ACTA301_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)		 3ldb ANTIBODY FAB
FRAGMENT HEAVY CHAIN
(Cricetulus
migratorius) 		3 / 3 VAL C 143
VAL C 190
GLN C 198
 None
 0.71A 5qheA-3ldbC:
undetectable		 5qheA-3ldbC:
23.32