SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3lm3'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_A_DVAA8_0
(GRAMICIDIN A)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 4 VAL A 335
TRP A 342
TRP A 334
 None
 1.36A 1gmkA-3lm3A:
undetectable
1gmkB-3lm3A:
undetectable		 1gmkA-3lm3A:
3.05
1gmkB-3lm3A:
3.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1L5Q_B_CFFB1864_1
(GLYCOGEN
PHOSPHORYLASE, LIVER
FORM)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 TRP A 342
HIS A 287
MET A 291
 None
 1.48A 1l5qB-3lm3A:
2.1		 1l5qB-3lm3A:
19.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N4F_A_ASRA140_0
(LYSOZYME C)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 ASN A 184
ALA A 197
ASN A 242
 None
 0.64A 1n4fA-3lm3A:
undetectable		 1n4fA-3lm3A:
15.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QU2_A_MRCA1993_2
(ISOLEUCYL-TRNA
SYNTHETASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 GLU A 294
TRP A 342
LYS A 129
 None
 1.34A 1qu2A-3lm3A:
undetectable		 1qu2A-3lm3A:
19.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T86_A_CAMA1422_0
(CYTOCHROME P450-CAM)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 THR A 338
LEU A  53
VAL A  51
VAL A 290
 None
 0.89A 1t86A-3lm3A:
undetectable		 1t86A-3lm3A:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2CPP_A_CAMA422_0
(CYTOCHROME P450-CAM)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 7 THR A 338
LEU A  53
VAL A  51
VAL A 290
 None
 0.94A 2cppA-3lm3A:
undetectable		 2cppA-3lm3A:
20.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_B_KLNB1499_1
(CYTOCHROME P450 3A4)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 7 PHE A 250
ILE A 387
THR A 247
GLY A 301
 None
 0.89A 2v0mB-3lm3A:
undetectable		 2v0mB-3lm3A:
21.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VQY_A_PARA1201_2
(AAC(6')-IB)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 TRP A 281
GLN A 258
TRP A 314
 None
 1.22A 2vqyA-3lm3A:
undetectable		 2vqyA-3lm3A:
19.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YA7_C_ZMRC1776_2
(NEURAMINIDASE A)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 6 ARG A 358
ILE A 175
GLU A 133
TYR A 170
 None
 1.44A 2ya7C-3lm3A:
undetectable		 2ya7C-3lm3A:
23.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JQ7_C_DX2C270_1
(PTERIDINE REDUCTASE
1)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 ASP A 239
VAL A 196
LEU A 243
PRO A 219
 None
 1.05A 3jq7C-3lm3A:
undetectable		 3jq7C-3lm3A:
20.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K39_N_BCZN1001_0
(NEURAMINIDASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 LEU A 109
ARG A  58
GLU A  75
ARG A 113
TYR A 116
 None
 1.45A 3k39N-3lm3A:
undetectable		 3k39N-3lm3A:
21.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K39_P_BCZP1001_0
(NEURAMINIDASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 LEU A 109
ARG A  58
GLU A  75
ARG A 113
TYR A 116
 None
 1.44A 3k39P-3lm3A:
undetectable		 3k39P-3lm3A:
21.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_Q_TFPQ201_1
(PROTEIN S100-A4)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 GLY A 306
PHE A 307
ILE A 296
PHE A 353
 None
 0.96A 3ko0O-3lm3A:
undetectable
3ko0Q-3lm3A:
undetectable		 3ko0O-3lm3A:
12.25
3ko0Q-3lm3A:
12.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NMU_J_SAMJ228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE
NOP5/NOP56 RELATED
PROTEIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 11 GLU A 352
ILE A 175
GLU A 133
PHE A 350
ALA A 197
 None
 1.19A 3nmuB-3lm3A:
undetectable
3nmuJ-3lm3A:
undetectable		 3nmuB-3lm3A:
22.54
3nmuJ-3lm3A:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_B_ACRB701_1
(ALPHA-GLUCOSIDASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ASP A 452
ILE A 443
ASP A 414
ARG A 396
ASP A 213
 None
 1.33A 3phaB-3lm3A:
undetectable		 3phaB-3lm3A:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_B_ACRB701_1
(ALPHA-GLUCOSIDASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ILE A 201
ASP A 452
ASP A 414
ARG A 396
ASP A 213
 None
 1.25A 3phaB-3lm3A:
undetectable		 3phaB-3lm3A:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_C_ACRC701_1
(ALPHA-GLUCOSIDASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ILE A 201
ASP A 452
ASP A 414
ARG A 396
ASP A 213
 None
 1.31A 3phaC-3lm3A:
2.6		 3phaC-3lm3A:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_D_ACRD701_1
(ALPHA-GLUCOSIDASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ILE A 201
ASP A 452
ASP A 414
ARG A 396
ASP A 213
 None
 1.26A 3phaD-3lm3A:
2.1		 3phaD-3lm3A:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QXV_D_MTXD2000_2
(ANTI-METHOTREXATE
CDR1-4 GRAFT VHH)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 LEU A 399
ARG A 469
ASN A 392
 None
 0.66A 3qxvD-3lm3A:
undetectable		 3qxvD-3lm3A:
13.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A7T_A_5FWA1002_1
(SUPEROXIDE DISMUTASE
[CU-ZN])		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 ASN A 364
TRP A 367
ASP A 236
 None
 1.31A 4a7tA-3lm3A:
undetectable
4a7tF-3lm3A:
undetectable		 4a7tA-3lm3A:
16.11
4a7tF-3lm3A:
16.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4B9Z_A_ACRA1818_1
(ALPHA-GLUCOSIDASE,
PUTATIVE, ADG31B)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ASP A 452
ILE A 443
ASP A 414
ARG A 396
ASP A 213
 None
 1.32A 4b9zA-3lm3A:
2.9		 4b9zA-3lm3A:
20.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EVR_A_BEZA401_0
(PUTATIVE ABC
TRANSPORTER SUBUNIT,
SUBSTRATE-BINDING
COMPONENT)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 11 LEU A 146
VAL A 151
TYR A 136
ALA A 158
SER A  65
 None
 1.13A 4evrA-3lm3A:
undetectable		 4evrA-3lm3A:
20.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J4V_A_SVRA301_1
(NUCLEOCAPSID PROTEIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 11 GLY A 214
ARG A 254
ALA A 253
GLN A 204
ILE A 440
 None
 1.49A 4j4vA-3lm3A:
undetectable		 4j4vA-3lm3A:
20.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L4A_A_CAMA502_0
(CAMPHOR
5-MONOOXYGENASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 THR A 338
LEU A  53
VAL A  51
VAL A 290
 None
 0.93A 4l4aA-3lm3A:
undetectable		 4l4aA-3lm3A:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L4D_A_CAMA503_0
(CAMPHOR
5-MONOOXYGENASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 THR A 338
LEU A  53
VAL A  51
VAL A 290
 None
 0.98A 4l4dA-3lm3A:
undetectable		 4l4dA-3lm3A:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L4E_A_CAMA503_0
(CAMPHOR
5-MONOOXYGENASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 THR A 338
LEU A  53
VAL A  51
VAL A 290
 None
 0.98A 4l4eA-3lm3A:
undetectable		 4l4eA-3lm3A:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L4F_A_CAMA503_0
(CAMPHOR
5-MONOOXYGENASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 THR A 338
LEU A  53
VAL A  51
VAL A 290
 None
 0.98A 4l4fA-3lm3A:
undetectable		 4l4fA-3lm3A:
20.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LRH_D_FOLD301_1
(FOLATE RECEPTOR
ALPHA)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 HIS A 297
TRP A 342
SER A 217
 None
 0.99A 4lrhD-3lm3A:
undetectable		 4lrhD-3lm3A:
17.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NKV_D_AERD601_2
(STEROID
17-ALPHA-HYDROXYLASE
/17,20 LYASE)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 5 GLY A 112
ASP A 111
GLU A 118
VAL A  84
 None
 0.90A 4nkvD-3lm3A:
undetectable		 4nkvD-3lm3A:
19.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V32_A_EF2A151_1
(CEREBLON ISOFORM 4)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 7 PRO A 216
PHE A 220
TRP A 357
PHE A 307
 None
 1.47A 4v32A-3lm3A:
undetectable		 4v32A-3lm3A:
18.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V32_C_EF2C151_1
(CEREBLON ISOFORM 4)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 7 PRO A 216
PHE A 220
TRP A 357
PHE A 307
 None
 1.33A 4v32C-3lm3A:
undetectable		 4v32C-3lm3A:
18.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XDQ_A_BEZA306_0
(GLYCOSIDE HYDROLASE
FAMILY PROTEIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		3 / 3 ARG A  88
ASP A 132
TRP A 102
 None
 1.11A 4xdqA-3lm3A:
undetectable		 4xdqA-3lm3A:
20.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HNZ_B_TA1B902_1
(TUBULIN BETA-2B
CHAIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 GLU A 424
LEU A  70
ALA A 143
SER A 181
PRO A 425
 None
 1.42A 5hnzB-3lm3A:
undetectable		 5hnzB-3lm3A:
20.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M54_E_TA1E502_1
(TUBULIN BETA-2B
CHAIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 HIS A 198
SER A 215
PHE A 227
ARG A 269
GLY A 209
 None
 1.17A 5m54E-3lm3A:
undetectable		 5m54E-3lm3A:
20.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MFX_A_ACTA701_0
(GENOME POLYPROTEIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 5 THR A  59
HIS A  79
ALA A 108
ASP A 111
 None
 1.37A 5mfxA-3lm3A:
2.3		 5mfxA-3lm3A:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ND2_B_TA1B601_1
(TUBULIN BETA-2B
CHAIN)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 GLU A 424
LEU A  70
ALA A 143
SER A 181
PRO A 425
 None
 1.38A 5nd2B-3lm3A:
undetectable		 5nd2B-3lm3A:
20.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CA1_A_MIGA701_1
(GLYCOSYL HYDROLASE,
FAMILY 31)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ASP A 452
ILE A 443
ASP A 414
ARG A 396
ASP A 213
 None
 1.38A 6ca1A-3lm3A:
2.0		 6ca1A-3lm3A:
10.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CA1_B_MIGB701_1
(GLYCOSYL HYDROLASE,
FAMILY 31)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ASP A 452
ILE A 443
ASP A 414
ARG A 396
ASP A 213
 None
 1.36A 6ca1B-3lm3A:
3.9		 6ca1B-3lm3A:
10.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CA3_A_MIGA701_1
(GLYCOSYL HYDROLASE,
FAMILY 31)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ASP A 452
ILE A 443
ASP A 414
ARG A 396
ASP A 213
 None
 1.38A 6ca3A-3lm3A:
undetectable		 6ca3A-3lm3A:
10.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CA3_B_MIGB701_1
(GLYCOSYL HYDROLASE,
FAMILY 31)		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		5 / 12 ASP A 452
ILE A 443
ASP A 414
ARG A 396
ASP A 213
 None
 1.39A 6ca3B-3lm3A:
2.1		 6ca3B-3lm3A:
10.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FBV_D_FI8D1904_0
(DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA
DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA')		 3lm3 UNCHARACTERIZED
PROTEIN
(Parabacteroides
distasonis) 		4 / 8 MET A 176
ILE A 175
GLU A  63
SER A  65
 None
 0.96A 6fbvC-3lm3A:
0.4		 6fbvC-3lm3A:
17.19