SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3lmf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1A4L_D_DCFD1853_1 (ADENOSINE DEAMINASE)	3lmf	UNCHARACTERIZED PROTEIN (Nitrosospira multiformis)	5 / 12	HIS A 32 ALA A 36 GLY A 37 HIS A 40 HIS A 45	None	1.38A	1a4lD-3lmfA: undetectable	1a4lD-3lmfA: 15.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3TWP_A_SALA404_1 (ANTHRANILATE PHOSPHORIBOSYLTRANSF ERASE)	3lmf	UNCHARACTERIZED PROTEIN (Nitrosospira multiformis)	4 / 7	ALA A 83 ARG A 102 ALA A 105 ARG A 109	None	1.15A	3twpA-3lmfA: undetectable	3twpA-3lmfA: 15.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5MAF_A_XINA403_2 (MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE)	3lmf	UNCHARACTERIZED PROTEIN (Nitrosospira multiformis)	4 / 5	LEU A 48 CYH A 52 CYH A 21 ASP A 82	None	1.21A	5mafA-3lmfA: undetectable	5mafA-3lmfA: 19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5QH8_A_ACTA302_0 (PEROXISOMAL COENZYME A DIPHOSPHATASE NUDT7)	3lmf	UNCHARACTERIZED PROTEIN (Nitrosospira multiformis)	3 / 3	CYH A 84 MET A 49 ASN A 51	None	1.12A	5qh8A-3lmfA: undetectable	5qh8A-3lmfA: 16.24

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1A4L_D_DCFD1853_1","ADENOSINE DEAMINASE","3lmf","UNCHARACTERIZED PROTEIN","Nitrosospira multiformis",5,"HIS A  32;ALA A  36;GLY A  37;HIS A  40;HIS A  45","None","1.38A","1a4lD-3lmfA:undetectable","1a4lD-3lmfA:15.00"],["3TWP_A_SALA404_1","ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE","3lmf","UNCHARACTERIZED PROTEIN","Nitrosospira multiformis",4,"ALA A  83;ARG A 102;ALA A 105;ARG A 109","None","1.15A","3twpA-3lmfA:undetectable","3twpA-3lmfA:15.12"],["5MAF_A_XINA403_2","MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE","3lmf","UNCHARACTERIZED PROTEIN","Nitrosospira multiformis",4,"LEU A  48;CYH A  52;CYH A  21;ASP A  82","None","1.21A","5mafA-3lmfA:undetectable","5mafA-3lmfA:19.35"],["5QH8_A_ACTA302_0","PEROXISOMAL COENZYME A DIPHOSPHATASE NUDT7","3lmf","UNCHARACTERIZED PROTEIN","Nitrosospira multiformis",3,"CYH A  84;MET A  49;ASN A  51","None","1.12A","5qh8A-3lmfA:undetectable","5qh8A-3lmfA:16.24"]]