SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3mgd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1ETB_2_T442129_1 (TRANSTHYRETIN)	3mgd	PREDICTED ACETYLTRANSFERASE (Clostridium acetobutylicum)	4 / 6	GLU A 53 THR A 88 ALA A 69 LEU A 50	None	1.17A	1etb2-3mgdA: undetectable	1etb2-3mgdA: 19.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5KC4_E_RBFE201_2 (RIBOFLAVIN TRANSPORTER RIBU)	3mgd	PREDICTED ACETYLTRANSFERASE (Clostridium acetobutylicum)	3 / 3	LYS A 36 ASP A 33 ILE A 12	None	0.85A	5kc4E-3mgdA: undetectable	5kc4E-3mgdA: 22.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5N0W_B_SAMB501_1 (PEPTIDE N-METHYLTRANSFERASE)	3mgd	PREDICTED ACETYLTRANSFERASE (Clostridium acetobutylicum)	4 / 5	TYR A 133 ALA A 102 GLN A 22 THR A 92	ACO A 200 (-4.6A) ACO A 200 (-3.1A) ACO A 200 (-4.5A) ACO A 200 (-3.0A)	1.05A	5n0wB-3mgdA: undetectable	5n0wB-3mgdA: 18.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5N4I_A_SAMA501_1 (PEPTIDE N-METHYLTRANSFERASE)	3mgd	PREDICTED ACETYLTRANSFERASE (Clostridium acetobutylicum)	4 / 5	TYR A 133 ALA A 102 GLN A 22 THR A 92	ACO A 200 (-4.6A) ACO A 200 (-3.1A) ACO A 200 (-4.5A) ACO A 200 (-3.0A)	1.06A	5n4iA-3mgdA: undetectable	5n4iA-3mgdA: 18.29

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1ETB_2_T442129_1","TRANSTHYRETIN","3mgd","PREDICTED ACETYLTRANSFERASE","Clostridium acetobutylicum",4,"GLU A  53;THR A  88;ALA A  69;LEU A  50","None","1.17A","1etb2-3mgdA:undetectable","1etb2-3mgdA:19.63"],["5KC4_E_RBFE201_2","RIBOFLAVIN TRANSPORTER RIBU","3mgd","PREDICTED ACETYLTRANSFERASE","Clostridium acetobutylicum",3,"LYS A  36;ASP A  33;ILE A  12","None","0.85A","5kc4E-3mgdA:undetectable","5kc4E-3mgdA:22.11"],["5N0W_B_SAMB501_1","PEPTIDE N-METHYLTRANSFERASE","3mgd","PREDICTED ACETYLTRANSFERASE","Clostridium acetobutylicum",4,"TYR A 133;ALA A 102;GLN A  22;THR A  92","ACO A 200 (-4.6A);ACO A 200 (-3.1A);ACO A 200 (-4.5A);ACO A 200 (-3.0A)","1.05A","5n0wB-3mgdA:undetectable","5n0wB-3mgdA:18.54"],["5N4I_A_SAMA501_1","PEPTIDE N-METHYLTRANSFERASE","3mgd","PREDICTED ACETYLTRANSFERASE","Clostridium acetobutylicum",4,"TYR A 133;ALA A 102;GLN A  22;THR A  92","ACO A 200 (-4.6A);ACO A 200 (-3.1A);ACO A 200 (-4.5A);ACO A 200 (-3.0A)","1.06A","5n4iA-3mgdA:undetectable","5n4iA-3mgdA:18.29"]]