SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3n5f'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DBB_H_STRH229_1
(IGG1-KAPPA DB3 FAB
(HEAVY CHAIN)
IGG1-KAPPA DB3 FAB
(LIGHT CHAIN))
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 ASN A  59
GLY A 135
HIS A 189
VAL A  95
None
None
CO  A 410 (-3.5A)
None
0.92A 1dbbH-3n5fA:
undetectable
1dbbL-3n5fA:
undetectable
1dbbH-3n5fA:
21.62
1dbbL-3n5fA:
17.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7B_B_HLTB4002_1
(SERUM ALBUMIN)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 4 ARG A  35
ALA A  37
ALA A 120
GLU A  54
None
1.23A 1e7bB-3n5fA:
2.4
1e7bB-3n5fA:
21.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R5L_A_VIVA301_1
(PROTEIN
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN))
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 4 SER A 374
SER A 386
LEU A 188
PHE A  89
None
1.42A 1r5lA-3n5fA:
0.6
1r5lA-3n5fA:
22.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V7Z_B_CRNB3401_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.95A 1v7zB-3n5fA:
3.9
1v7zB-3n5fA:
22.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V7Z_F_CRNF7401_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.95A 1v7zF-3n5fA:
3.9
1v7zF-3n5fA:
22.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2CDQ_B_SAMB1500_0
(ASPARTOKINASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 7 ASP A 357
ARG A 177
LEU A  75
GLU A 117
None
0.98A 2cdqB-3n5fA:
undetectable
2cdqB-3n5fA:
22.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_B_KLNB1498_1
(CYTOCHROME P450 3A4)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 9 LEU A 265
ILE A 219
GLU A 251
GLY A 260
LEU A 283
None
1.23A 2v0mB-3n5fA:
undetectable
2v0mB-3n5fA:
22.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VPP_A_GEOA1210_1
(DEOXYNUCLEOSIDE
KINASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 12 ILE A 190
GLU A 125
VAL A  83
ALA A 355
GLU A 384
None
CO  A 410 ( 4.7A)
None
None
None
1.28A 2vppA-3n5fA:
undetectable
2vppA-3n5fA:
18.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A6J_A_CRNA303_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.94A 3a6jA-3n5fA:
4.0
3a6jA-3n5fA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A6J_B_CRNB304_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 7 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.94A 3a6jB-3n5fA:
3.8
3a6jB-3n5fA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A6J_C_CRNC305_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.93A 3a6jC-3n5fA:
3.9
3a6jC-3n5fA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A6J_E_CRNE306_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.94A 3a6jE-3n5fA:
3.8
3a6jE-3n5fA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A6J_F_CRNF307_1
(CREATININE
AMIDOHYDROLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 HIS A 189
ASP A  90
HIS A 380
HIS A 356
CO  A 410 (-3.5A)
CO  A 410 (-2.8A)
None
CO  A 410 ( 4.7A)
0.94A 3a6jF-3n5fA:
3.9
3a6jF-3n5fA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CLD_B_GW6B2_2
(GLUCOCORTICOID
RECEPTOR)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 LEU A 143
ALA A 159
LEU A 158
MET A 162
None
0.87A 3cldB-3n5fA:
undetectable
3cldB-3n5fA:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CZH_A_D2VA602_1
(CYTOCHROME P450 2R1)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 12 VAL A 332
ALA A 335
ALA A 406
VAL A 206
ILE A 370
None
1.15A 3czhA-3n5fA:
undetectable
3czhA-3n5fA:
21.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DL9_A_V2HA602_0
(CYTOCHROME P450 2R1)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 12 MET A 105
THR A 104
VAL A 118
GLU A 100
VAL A 203
None
1.25A 3dl9A-3n5fA:
undetectable
3dl9A-3n5fA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DZY_A_9CRA463_1
(RETINOIC ACID
RECEPTOR RXR-ALPHA)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 12 ALA A  97
ASN A 106
LEU A 398
ALA A 395
LEU A  50
None
1.00A 3dzyA-3n5fA:
undetectable
3dzyA-3n5fA:
22.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IHT_A_SAMA200_0
(S-ADENOSYL-L-METHION
INE METHYL
TRANSFERASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 12 GLY A 211
ILE A 300
ASP A 284
LEU A 283
PHE A 217
None
0.87A 3ihtA-3n5fA:
undetectable
3ihtA-3n5fA:
18.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZTV_A_ADNA1600_1
(NAD NUCLEOTIDASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 9 ASN A  85
GLY A  24
GLY A  23
SER A  82
GLY A  86
None
1.03A 3ztvA-3n5fA:
undetectable
3ztvA-3n5fA:
21.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5L_A_UEGA300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 11 GLY A  91
ALA A  97
GLY A  94
VAL A 372
CYH A 391
CO  A 410 ( 4.8A)
None
None
None
None
1.09A 4c5lA-3n5fA:
undetectable
4c5lA-3n5fA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5N_D_UEGD300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 10 GLY A  91
ALA A  97
GLY A  94
VAL A 372
CYH A 391
CO  A 410 ( 4.8A)
None
None
None
None
1.18A 4c5nD-3n5fA:
2.0
4c5nD-3n5fA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HVR_A_SALA203_1
(3-HYDROXYANTHRANILAT
E 3,4-DIOXYGENASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 7 ASP A  90
GLU A 125
HIS A 380
GLU A 124
CO  A 410 (-2.8A)
CO  A 410 ( 4.7A)
None
CO  A 410 (-3.3A)
1.03A 4hvrA-3n5fA:
undetectable
4hvrA-3n5fA:
18.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IB4_A_ERMA2001_2
(CHIMERA PROTEIN OF
HUMAN
5-HYDROXYTRYPTAMINE
RECEPTOR 2B AND E.
COLI SOLUBLE
CYTOCHROME B562)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 7 LEU A 283
LYS A 216
GLN A 264
LEU A 265
None
0.90A 4ib4A-3n5fA:
2.0
4ib4A-3n5fA:
23.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MS4_A_2C0A501_1
(GAMMA-AMINOBUTYRIC
ACID TYPE B RECEPTOR
SUBUNIT 1)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 SER A  78
HIS A  79
ILE A 190
GLU A 125
CO  A 410 ( 4.7A)
CO  A 410 (-3.2A)
None
CO  A 410 ( 4.7A)
1.15A 4ms4A-3n5fA:
2.0
4ms4A-3n5fA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PD4_C_AOQC4003_1
(CYTOCHROME B)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 12 GLY A 394
VAL A 397
ILE A 370
LEU A 196
PHE A 348
None
1.08A 4pd4C-3n5fA:
undetectable
4pd4C-3n5fA:
21.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PQA_A_X8ZA401_1
(SUCCINYL-DIAMINOPIME
LATE DESUCCINYLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 11 HIS A  79
ASP A  90
GLU A 124
GLU A 125
HIS A 380
CO  A 410 (-3.2A)
CO  A 410 (-2.8A)
CO  A 410 (-3.3A)
CO  A 410 ( 4.7A)
None
0.41A 4pqaA-3n5fA:
28.2
4pqaA-3n5fA:
25.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PQA_A_X8ZA401_1
(SUCCINYL-DIAMINOPIME
LATE DESUCCINYLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 11 HIS A  79
ASP A  90
GLU A 124
GLY A 353
HIS A 380
CO  A 410 (-3.2A)
CO  A 410 (-2.8A)
CO  A 410 (-3.3A)
None
None
0.52A 4pqaA-3n5fA:
28.2
4pqaA-3n5fA:
25.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PQA_A_X8ZA401_1
(SUCCINYL-DIAMINOPIME
LATE DESUCCINYLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
5 / 11 HIS A  79
ASP A  90
GLU A 125
GLY A 353
HIS A 380
CO  A 410 (-3.2A)
CO  A 410 (-2.8A)
CO  A 410 ( 4.7A)
None
None
0.64A 4pqaA-3n5fA:
28.2
4pqaA-3n5fA:
25.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XEY_A_1N1A601_2
(TYROSINE-PROTEIN
KINASE ABL1)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
3 / 3 MET A 369
ASP A  90
PHE A  89
None
CO  A 410 (-2.8A)
None
0.92A 4xeyA-3n5fA:
undetectable
4xeyA-3n5fA:
23.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XEY_B_1N1B601_2
(TYROSINE-PROTEIN
KINASE ABL1)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
3 / 3 MET A 369
ASP A  90
PHE A  89
None
CO  A 410 (-2.8A)
None
0.92A 4xeyB-3n5fA:
1.4
4xeyB-3n5fA:
23.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HW8_H_FK5H201_1
(FK506-BINDING
PROTEIN 1)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 VAL A 247
ILE A 248
ILE A 213
PHE A 217
None
0.84A 5hw8H-3n5fA:
undetectable
5hw8H-3n5fA:
16.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NCD_C_ACTC301_0
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 6 ASP A  90
HIS A 189
HIS A  79
HIS A 380
CO  A 410 (-2.8A)
CO  A 410 (-3.5A)
CO  A 410 (-3.2A)
None
0.90A 5ncdB-3n5fA:
undetectable
5ncdC-3n5fA:
undetectable
5ncdB-3n5fA:
20.34
5ncdC-3n5fA:
20.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NEK_B_AZMB302_1
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 ASP A  90
HIS A 189
HIS A  79
HIS A 380
CO  A 410 (-2.8A)
CO  A 410 (-3.5A)
CO  A 410 (-3.2A)
None
1.01A 5nekB-3n5fA:
undetectable
5nekB-3n5fA:
11.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NEK_D_AZMD302_1
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 8 ASP A  90
HIS A 189
HIS A  79
HIS A 380
CO  A 410 (-2.8A)
CO  A 410 (-3.5A)
CO  A 410 (-3.2A)
None
0.88A 5nekD-3n5fA:
undetectable
5nekD-3n5fA:
11.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6N91_A_DCFA401_1
(ADENOSINE DEAMINASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 4 HIS A  79
LEU A  28
TYR A  84
GLY A  86
CO  A 410 (-3.2A)
None
None
None
1.41A 6n91A-3n5fA:
undetectable
6n91A-3n5fA:
14.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6N91_B_DCFB401_1
(ADENOSINE DEAMINASE)
3n5f N-CARBAMOYL-L-AMINO
ACID HYDROLASE

(Geobacillus
stearothermophil
us)
4 / 4 HIS A  79
LEU A  28
TYR A  84
GLY A  86
CO  A 410 (-3.2A)
None
None
None
1.41A 6n91B-3n5fA:
undetectable
6n91B-3n5fA:
14.63