SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ndy'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JNO_A_DVAA6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.77A 1jnoA-3ndyA:
undetectable		 1jnoA-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JNO_B_DVAB6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.78A 1jnoB-3ndyA:
undetectable		 1jnoB-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JO3_B_DVAB6_0
(GRAMICIDIN B)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.93A 1jo3B-3ndyA:
undetectable		 1jo3B-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JO4_A_DVAA6_0
(GRAMICIDIN C)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.95A 1jo4A-3ndyA:
undetectable		 1jo4A-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JO4_B_DVAB6_0
(GRAMICIDIN C)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.95A 1jo4B-3ndyA:
undetectable		 1jo4B-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MAG_A_DVAA6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.83A 1magA-3ndyA:
undetectable		 1magA-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MAG_B_DVAB6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.83A 1magB-3ndyA:
undetectable		 1magB-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NG8_A_DVAA6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.79A 1ng8A-3ndyA:
undetectable		 1ng8A-3ndyA:
6.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NG8_B_DVAB6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.79A 1ng8B-3ndyA:
undetectable		 1ng8B-3ndyA:
6.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NRU_A_DVAA6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.88A 1nruA-3ndyA:
undetectable		 1nruA-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NRU_B_DVAB6_0
(GRAMICIDIN A)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 ALA A  34
VAL A  66
TRP A  84
 None
 0.88A 1nruB-3ndyA:
undetectable		 1nruB-3ndyA:
7.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_C_NCAC439_0
(ADP-RIBOSYL CYCLASE)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 TRP A 331
PHE A 324
TRP A  26
 None
 1.43A 1r15C-3ndyA:
undetectable		 1r15C-3ndyA:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_F_NCAF469_0
(ADP-RIBOSYL CYCLASE)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 TRP A 331
PHE A 324
TRP A  26
 None
 1.43A 1r15F-3ndyA:
undetectable		 1r15F-3ndyA:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_G_NCAG479_0
(ADP-RIBOSYL CYCLASE)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 TRP A 331
PHE A 324
TRP A  26
 None
 1.43A 1r15G-3ndyA:
undetectable		 1r15G-3ndyA:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_H_NCAH489_0
(ADP-RIBOSYL CYCLASE)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 TRP A 331
PHE A 324
TRP A  26
 None
 1.43A 1r15H-3ndyA:
undetectable		 1r15H-3ndyA:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WU8_C_ADNC502_1
(HYPOTHETICAL PROTEIN
PH0463)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		4 / 7 ASN A 105
ASN A  27
HIS A 227
VAL A 272
 None
 1.25A 1wu8A-3ndyA:
undetectable
1wu8C-3ndyA:
undetectable		 1wu8A-3ndyA:
20.51
1wu8C-3ndyA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DQY_A_CHDA1_0
(LIVER
CARBOXYLESTERASE 1)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		4 / 5 TRP A 244
GLY A 240
LYS A 281
PRO A 231
 None
 1.33A 2dqyA-3ndyA:
0.6		 2dqyA-3ndyA:
19.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DQY_B_CHDB2_0
(LIVER
CARBOXYLESTERASE 1)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 TRP A 244
LYS A 281
PRO A 231
 None
 1.36A 2dqyB-3ndyA:
0.8		 2dqyB-3ndyA:
19.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PNJ_B_CHDB502_0
(FERROCHELATASE,
MITOCHONDRIAL)		 3ndy ENDOGLUCANASE D
ENDOGLUCANASE D
(Clostridium
cellulovorans;
Clostridium
cellulovorans) 		4 / 7 MET A  22
ILE A 223
ARG A 269
GLY E 447
 None
 1.17A 2pnjB-3ndyA:
undetectable		 2pnjB-3ndyA:
22.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V3D_A_NBVA1503_1
(GLUCOSYLCERAMIDASE)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 ASN A 151
GLU A 152
HIS A 227
GLU A 275
TRP A 308
 BTB  A   1 ( 4.6A)
BTB  A   1 ( 4.0A)
None
BTB  A   1 (-3.7A)
BTB  A   1 (-3.7A)
 0.62A 2v3dA-3ndyA:
8.1		 2v3dA-3ndyA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZBU_D_ADND504_1
(UNCHARACTERIZED
CONSERVED PROTEIN)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 PHE A  96
ASN A  93
PHE A   7
 None
 1.06A 2zbuD-3ndyA:
undetectable		 2zbuD-3ndyA:
22.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KKZ_B_SAMB302_0
(UNCHARACTERIZED
PROTEIN Q5LES9)		 3ndy ENDOGLUCANASE D
ENDOGLUCANASE D
(Clostridium
cellulovorans;
Clostridium
cellulovorans) 		5 / 12 GLN A  16
GLY A 268
GLY E 450
GLY E 447
SER E 460
 None
 1.01A 3kkzB-3ndyA:
undetectable		 3kkzB-3ndyA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8X_A_NIMA701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 TYR E 387
ILE E 465
GLY E 396
ALA E 397
SER E 392
 None
 1.15A 3n8xA-3ndyE:
undetectable		 3n8xA-3ndyE:
9.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8X_B_NIMB1701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 TYR E 387
ILE E 465
GLY E 396
ALA E 397
SER E 392
 None
 1.08A 3n8xB-3ndyE:
undetectable		 3n8xB-3ndyE:
9.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8Y_A_DIFA701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 11 TYR E 387
ILE E 465
GLY E 396
ALA E 397
SER E 392
 None
 1.09A 3n8yA-3ndyE:
undetectable		 3n8yA-3ndyE:
9.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W2T_B_LF7B801_1
(DIPEPTIDYL PEPTIDASE
4)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 ARG A  63
GLU A 148
TYR A 229
ASN A 151
HIS A 107
 None
None
BTB  A   1 (-4.1A)
BTB  A   1 ( 4.6A)
BTB  A   1 (-4.1A)
 1.47A 3w2tB-3ndyA:
undetectable		 3w2tB-3ndyA:
18.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4BZ6_B_SHHB700_1
(HISTONE DEACETYLASE
8)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 ASP A  99
ASP A 143
HIS A 144
PHE A  96
GLY A   9
 None
 1.42A 4bz6A-3ndyA:
undetectable
4bz6B-3ndyA:
undetectable		 4bz6A-3ndyA:
20.92
4bz6B-3ndyA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KN2_C_LYAC304_2
(FOLATE RECEPTOR BETA)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		3 / 3 TYR A 176
GLN A 122
TRP A 131
 None
 1.13A 4kn2C-3ndyA:
undetectable		 4kn2C-3ndyA:
19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Q0B_A_NVPA901_1
(HIV-1 REVERSE
TRANSCRIPTASE, P66
SUBUNIT)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		4 / 8 LYS E 404
TYR E 387
TRP E 418
LEU E 416
 None
 1.12A 4q0bA-3ndyE:
undetectable		 4q0bA-3ndyE:
11.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QZU_D_ACTD202_0
(RETINOL-BINDING
PROTEIN 2)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		4 / 5 ASP A  33
VAL A  66
TRP A  68
GLU A 109
 None
 1.48A 4qzuA-3ndyA:
0.0
4qzuD-3ndyA:
0.0		 4qzuA-3ndyA:
18.29
4qzuD-3ndyA:
18.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UBB_A_SAMA301_0
(ALPHA N-TERMINAL
PROTEIN
METHYLTRANSFERASE 1B)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 VAL A  13
MET A 197
SER A 225
GLN A  17
VAL A  19
 None
 1.17A 5ubbA-3ndyA:
undetectable		 5ubbA-3ndyA:
18.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X7P_B_ACRB1421_1
(GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		4 / 6 GLU A  89
TYR A 141
GLY A 142
GLY A   9
 None
 0.93A 5x7pB-3ndyA:
undetectable		 5x7pB-3ndyA:
15.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B1E_B_LF7B801_1
(DIPEPTIDYL PEPTIDASE
4)		 3ndy ENDOGLUCANASE D
(Clostridium
cellulovorans) 		5 / 12 ARG A  63
GLU A 148
TYR A 229
ASN A 151
HIS A 107
 None
None
BTB  A   1 (-4.1A)
BTB  A   1 ( 4.6A)
BTB  A   1 (-4.1A)
 1.48A 6b1eB-3ndyA:
undetectable		 6b1eB-3ndyA:
18.99