SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ne8'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2G70_A_SAMA2001_1
(PHENYLETHANOLAMINE
N-METHYLTRANSFERASE)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		4 / 7 GLY A 268
THR A 270
TYR A 272
ASP A 374
 None
 1.07A 2g70A-3ne8A:
undetectable		 2g70A-3ne8A:
20.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QE6_B_SAMB400_0
(UNCHARACTERIZED
PROTEIN TFU_2867)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		5 / 12 GLY A 189
GLY A 193
ASP A 297
ARG A 237
GLY A 187
 None
 0.98A 2qe6B-3ne8A:
undetectable		 2qe6B-3ne8A:
24.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZW9_B_SAMB801_1
(LEUCINE CARBOXYL
METHYLTRANSFERASE 2)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		4 / 8 ASN A 329
SER A 332
LYS A 336
TYR A 401
 GOL  A 413 ( 4.0A)
None
None
GOL  A 413 ( 4.9A)
 1.02A 2zw9B-3ne8A:
undetectable		 2zw9B-3ne8A:
15.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_B_CE3B304_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		4 / 5 ASN A 291
THR A 270
SER A 279
ARG A 347
 None
 1.26A 3hlwB-3ne8A:
undetectable		 3hlwB-3ne8A:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W67_C_VIVC301_0
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		5 / 12 ILE A 339
TRP A 383
ALA A 392
ILE A 256
LEU A 184
 None
None
FMT  A 411 ( 3.9A)
None
None
 1.06A 3w67C-3ne8A:
undetectable		 3w67C-3ne8A:
25.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		5 / 12 ILE A 201
THR A 270
ARG A 384
LEU A 378
LEU A 286
 None
 1.24A 4qynB-3ne8A:
undetectable		 4qynB-3ne8A:
18.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y7P_G_CHDG401_0
(BILE SALT HYDROLASE)		 3ne8 N-ACETYLMURAMOYL-L-A
LANINE AMIDASE
(Bartonella
henselae) 		5 / 10 LEU A 378
ILE A 364
ASN A 371
LEU A 334
GLU A 375
 None
 1.21A 5y7pG-3ne8A:
undetectable		 5y7pG-3ne8A:
22.26