SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3nhe'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E71_M_ASCM995_0
(MYROSINASE MA1)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 ILE A 411
PHE A 318
PHE A 339
PHE A 361
None
1.03A 1e71M-3nheA:
undetectable
1e71M-3nheA:
19.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E72_M_ASCM995_0
(MYROSINASE MA1)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 ILE A 411
PHE A 318
PHE A 339
PHE A 361
None
1.02A 1e72M-3nheA:
undetectable
1e72M-3nheA:
19.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TV8_B_SAMB2501_0
(MOLYBDENUM COFACTOR
BIOSYNTHESIS PROTEIN
A)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 TYR A 294
THR A 327
THR A 324
MET A 301
None
1.24A 1tv8B-3nheA:
undetectable
1tv8B-3nheA:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V54_P_CHDP4271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE III
CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 8 LYS A 420
LEU A 419
GLN A 492
PHE A 438
None
0.93A 1v54P-3nheA:
undetectable
1v54W-3nheA:
undetectable
1v54P-3nheA:
20.23
1v54W-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2CL5_B_SAMB1217_1
(CATECHOL
O-METHYLTRANSFERASE)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 6 SER A 421
SER A 442
GLN A 359
ASP A 436
None
1.34A 2cl5B-3nheA:
undetectable
2cl5B-3nheA:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DYR_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 8 LYS A 420
LEU A 419
GLN A 492
PHE A 438
None
0.91A 2dyrP-3nheA:
undetectable
2dyrW-3nheA:
undetectable
2dyrP-3nheA:
20.23
2dyrW-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIK_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 8 LYS A 420
LEU A 419
GLN A 492
PHE A 438
None
0.93A 2eikP-3nheA:
undetectable
2eikW-3nheA:
undetectable
2eikP-3nheA:
20.23
2eikW-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJT_A_SAMA501_1
(N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
3 / 3 ARG A 493
ASP A 408
ASP A 303
None
0.78A 2ejtA-3nheA:
undetectable
2ejtA-3nheA:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W9S_A_TOPA1160_1
(DIHYDROFOLATE
REDUCTASE TYPE 1
FROM TN4003)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
5 / 11 LEU A 500
LEU A 528
ILE A 491
PHE A 438
THR A 463
None
0.98A 2w9sA-3nheA:
undetectable
2w9sA-3nheA:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W9S_B_TOPB1160_1
(DIHYDROFOLATE
REDUCTASE TYPE 1
FROM TN4003)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
5 / 11 LEU A 500
LEU A 528
ILE A 491
PHE A 438
THR A 463
None
0.94A 2w9sB-3nheA:
undetectable
2w9sB-3nheA:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W9S_D_TOPD1158_1
(DIHYDROFOLATE
REDUCTASE TYPE 1
FROM TN4003)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
5 / 10 LEU A 500
LEU A 528
ILE A 491
PHE A 438
THR A 463
None
1.14A 2w9sD-3nheA:
undetectable
2w9sD-3nheA:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W9S_F_TOPF1159_1
(DIHYDROFOLATE
REDUCTASE TYPE 1
FROM TN4003)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
5 / 10 LEU A 500
LEU A 528
ILE A 491
PHE A 438
THR A 463
None
1.12A 2w9sF-3nheA:
undetectable
2w9sF-3nheA:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZVJ_A_SAMA301_1
(CATECHOL
O-METHYLTRANSFERASE)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 6 SER A 421
SER A 442
GLN A 359
ASP A 436
None
1.31A 2zvjA-3nheA:
undetectable
2zvjA-3nheA:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG2_C_CHDC271_0
(CYTOCHROME C OXIDASE
SUBUNIT 3)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
1.01A 3ag2C-3nheA:
undetectable
3ag2C-3nheA:
20.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LN1_D_CELD682_2
(PROSTAGLANDIN G/H
SYNTHASE 2)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 5 LEU A 598
ARG A 493
ILE A 491
PHE A 494
None
1.23A 3ln1D-3nheA:
undetectable
3ln1D-3nheA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3X2Q_C_CHDC304_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.93A 3x2qC-3nheA:
undetectable
3x2qJ-3nheA:
undetectable
3x2qC-3nheA:
20.23
3x2qJ-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3X2Q_P_CHDP307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.91A 3x2qP-3nheA:
undetectable
3x2qW-3nheA:
undetectable
3x2qP-3nheA:
20.23
3x2qW-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N09_A_ADNA401_2
(ADENOSINE KINASE)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 4 LEU A 502
SER A 442
LEU A 593
LEU A 455
None
1.01A 4n09A-3nheA:
undetectable
4n09A-3nheA:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OBW_A_SAMA602_1
(2-METHOXY-6-POLYPREN
YL-1,4-BENZOQUINOL
METHYLASE,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
3 / 3 ASP A 392
ASN A 535
SER A 421
None
0.86A 4obwA-3nheA:
undetectable
4obwA-3nheA:
21.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1A_C_CHDC304_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.94A 5b1aC-3nheA:
undetectable
5b1aJ-3nheA:
undetectable
5b1aC-3nheA:
20.23
5b1aJ-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1A_P_CHDP305_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.87A 5b1aP-3nheA:
undetectable
5b1aW-3nheA:
undetectable
5b1aP-3nheA:
20.23
5b1aW-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B3S_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.90A 5b3sC-3nheA:
undetectable
5b3sJ-3nheA:
undetectable
5b3sC-3nheA:
20.23
5b3sJ-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B3S_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.90A 5b3sP-3nheA:
undetectable
5b3sP-3nheA:
20.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EVY_X_SALX502_1
(SALICYLATE
HYDROXYLASE)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 5 SER A 286
GLN A 283
LEU A 266
PHE A 573
None
1.27A 5evyX-3nheA:
undetectable
5evyX-3nheA:
21.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FHR_B_SAMB303_1
(CATECHOL
O-METHYLTRANSFERASE)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 5 SER A 421
SER A 442
GLN A 359
ASP A 436
None
1.32A 5fhrB-3nheA:
undetectable
5fhrB-3nheA:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IL1_A_SAMA601_0
(METTL3)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
5 / 12 ILE A 343
LEU A 282
GLU A 360
PHE A 361
ARG A 363
None
1.18A 5il1A-3nheA:
undetectable
5il1A-3nheA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IY5_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.87A 5iy5C-3nheA:
undetectable
5iy5J-3nheA:
undetectable
5iy5C-3nheA:
21.04
5iy5J-3nheA:
10.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5XU8_A_DX4A701_0
(UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
7 / 8 GLY A 268
LEU A 269
ASN A 279
SER A 280
GLN A 283
ALA A 560
PHE A 573
None
None
CME  A 276 ( 4.0A)
CME  A 276 ( 4.5A)
None
None
None
0.10A 5xu8A-3nheA:
49.3
5xu8A-3nheA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z84_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.93A 5z84C-3nheA:
undetectable
5z84J-3nheA:
undetectable
5z84C-3nheA:
20.23
5z84J-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z85_C_CHDC306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.94A 5z85C-3nheA:
undetectable
5z85J-3nheA:
undetectable
5z85C-3nheA:
20.23
5z85J-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCO_C_CHDC306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.92A 5zcoC-3nheA:
undetectable
5zcoJ-3nheA:
undetectable
5zcoC-3nheA:
20.23
5zcoJ-3nheA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCQ_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
3nhe UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 2

(Homo
sapiens)
4 / 7 LEU A 419
GLN A 492
PHE A 438
LEU A 441
None
0.92A 5zcqP-3nheA:
undetectable
5zcqW-3nheA:
undetectable
5zcqP-3nheA:
20.23
5zcqW-3nheA:
10.64