SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3od1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AXW_A_MTXA732_1
(THYMIDYLATE SYNTHASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 12 LEU A 249
GLY A 294
PHE A 313
VAL A 160
ALA A 161
None
1.01A 1axwA-3od1A:
undetectable
1axwA-3od1A:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GTB_A_PZQA901_0
(GLUTATHIONE
S-TRANSFERASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
3 / 3 GLN A  63
TYR A 190
ARG A 186
None
0.69A 1gtbA-3od1A:
undetectable
1gtbA-3od1A:
20.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_A_HISA450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
8 / 10 THR A  83
TYR A 105
ARG A 111
GLN A 125
GLU A 129
TYR A 274
TYR A 275
GLY A 294
None
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
None
1.06A 1httA-3od1A:
27.7
1httA-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_A_HISA450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 10 THR A  83
TYR A 105
GLU A 129
TYR A 274
TYR A 275
GLY A 295
None
1.26A 1httA-3od1A:
27.7
1httA-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_A_HISA450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 10 TYR A 105
ARG A 111
GLN A 125
GLU A 129
TYR A 274
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
1.17A 1httA-3od1A:
27.7
1httA-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_B_HISB450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
9 / 12 THR A  83
ARG A 111
GLN A 125
GLU A 129
TYR A 274
TYR A 275
GLY A 294
TYR A 297
GLY A 312
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
None
None
None
0.82A 1httB-3od1A:
27.1
1httB-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_B_HISB450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 12 THR A  83
GLU A 129
TYR A 274
TYR A 275
GLY A 295
GLY A 312
None
1.43A 1httB-3od1A:
27.1
1httB-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_C_HISC450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
8 / 12 THR A  83
GLN A 125
GLU A 129
TYR A 274
TYR A 275
GLY A 294
TYR A 297
GLY A 312
None
PEG  A 398 ( 4.2A)
None
None
None
None
None
None
0.69A 1httC-3od1A:
27.6
1httC-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_C_HISC450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 12 THR A  83
GLU A 129
TYR A 274
TYR A 275
GLY A 295
GLY A 312
None
1.41A 1httC-3od1A:
27.6
1httC-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_D_HISD450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
7 / 12 THR A  83
ARG A 111
GLN A 125
GLU A 129
TYR A 275
GLY A 294
GLY A 312
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
None
0.73A 1httD-3od1A:
27.2
1httD-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_D_HISD450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
7 / 12 THR A  83
GLN A 125
GLU A 129
TYR A 274
TYR A 275
GLY A 294
GLY A 312
None
PEG  A 398 ( 4.2A)
None
None
None
None
None
0.69A 1httD-3od1A:
27.2
1httD-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HTT_D_HISD450_0
(HISTIDYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 12 THR A  83
GLU A 129
TYR A 274
TYR A 275
GLY A 295
GLY A 312
None
1.38A 1httD-3od1A:
27.2
1httD-3od1A:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KT3_A_RTLA184_0
(PLASMA
RETINOL-BINDING
PROTEIN)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 7 LEU A 171
LEU A 266
MET A 246
LEU A 243
None
0.95A 1kt3A-3od1A:
undetectable
1kt3A-3od1A:
19.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TSN_A_C2FA266_0
(THYMIDYLATE SYNTHASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 12 LEU A 249
GLY A 294
PHE A 313
VAL A 160
ALA A 161
None
1.02A 1tsnA-3od1A:
undetectable
1tsnA-3od1A:
22.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AKE_A_TRPA479_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 12 THR A 311
GLY A 277
THR A 276
ILE A 131
GLN A 309
None
1.36A 2akeA-3od1A:
undetectable
2akeA-3od1A:
20.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AZX_B_TRPB603_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 12 THR A 311
GLY A 277
THR A 276
ILE A 131
GLN A 309
None
1.35A 2azxB-3od1A:
undetectable
2azxB-3od1A:
21.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HA4_B_ACTB601_0
(ACETYLCHOLINESTERASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 7 GLY A 223
GLY A 222
ALA A 225
ALA A 226
BME  A 401 (-4.2A)
BME  A 401 ( 3.7A)
BME  A 401 (-3.5A)
BME  A 401 ( 4.4A)
0.65A 2ha4B-3od1A:
undetectable
2ha4B-3od1A:
23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HCN_B_CHDB2_0
(FERROCHELATASE,
MITOCHONDRIAL)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
3 / 3 LEU A 220
LEU A 217
ARG A 213
None
0.60A 3hcnB-3od1A:
undetectable
3hcnB-3od1A:
23.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LM8_A_VIBA223_1
(THIAMINE
PYROPHOSPHOKINASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 7 TYR A 110
LEU A  68
LEU A  48
THR A  45
None
1.01A 3lm8A-3od1A:
undetectable
3lm8C-3od1A:
undetectable
3lm8A-3od1A:
20.65
3lm8C-3od1A:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A3P_A_ACTA1223_0
(UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 15)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 5 ASP A 133
THR A 311
LEU A 130
GLU A 141
None
1.39A 4a3pA-3od1A:
undetectable
4a3pA-3od1A:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RDX_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 7 THR A  83
GLU A 129
TYR A 274
GLY A 294
TYR A 297
GLY A 312
None
0.97A 4rdxA-3od1A:
29.1
4rdxA-3od1A:
27.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RDX_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 7 THR A  83
GLU A 129
TYR A 274
GLY A 295
GLY A 312
None
1.36A 4rdxA-3od1A:
29.1
4rdxA-3od1A:
27.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RDX_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 7 THR A  83
GLU A 129
TYR A 275
TYR A 297
GLY A 312
None
0.78A 4rdxA-3od1A:
29.1
4rdxA-3od1A:
27.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RMJ_A_NCAA402_0
(NAD-DEPENDENT
PROTEIN DEACETYLASE
SIRTUIN-2)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 7 ILE A 234
LEU A 217
LEU A 172
ASP A 174
None
0.88A 4rmjA-3od1A:
undetectable
4rmjA-3od1A:
22.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDN_O_EVPO2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 6 SER A 259
GLU A 254
GLY A 284
GLY A 282
None
0.90A 5cdnC-3od1A:
undetectable
5cdnD-3od1A:
undetectable
5cdnC-3od1A:
23.40
5cdnD-3od1A:
19.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDN_P_EVPP2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 6 SER A 259
GLU A 254
GLY A 284
GLY A 282
None
0.94A 5cdnT-3od1A:
2.4
5cdnU-3od1A:
undetectable
5cdnT-3od1A:
23.40
5cdnU-3od1A:
19.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 12 THR A  83
ARG A 111
GLN A 125
GLU A 129
TYR A 274
TYR A 297
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
1.28A 5e3iA-3od1A:
28.0
5e3iA-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
7 / 12 THR A  83
ARG A 111
GLN A 125
GLU A 129
TYR A 275
TYR A 297
GLY A 312
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
None
0.77A 5e3iA-3od1A:
28.0
5e3iA-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
8 / 12 THR A  83
GLN A 125
GLU A 129
TYR A 274
TYR A 275
GLY A 294
TYR A 297
GLY A 312
None
PEG  A 398 ( 4.2A)
None
None
None
None
None
None
0.69A 5e3iA-3od1A:
28.0
5e3iA-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_A_HISA502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 12 THR A  83
GLU A 129
TYR A 274
TYR A 275
GLY A 295
GLY A 312
None
1.42A 5e3iA-3od1A:
28.0
5e3iA-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_B_HISB502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 11 THR A  83
ARG A 111
GLN A 125
GLU A 129
TYR A 274
TYR A 297
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
1.30A 5e3iB-3od1A:
28.4
5e3iB-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_B_HISB502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
8 / 11 THR A  83
ARG A 111
GLN A 125
GLU A 129
TYR A 275
GLY A 294
TYR A 297
GLY A 312
None
PEG  A 399 (-4.6A)
PEG  A 398 ( 4.2A)
None
None
None
None
None
0.74A 5e3iB-3od1A:
28.4
5e3iB-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_B_HISB502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
8 / 11 THR A  83
GLN A 125
GLU A 129
TYR A 274
TYR A 275
GLY A 294
TYR A 297
GLY A 312
None
PEG  A 398 ( 4.2A)
None
None
None
None
None
None
0.70A 5e3iB-3od1A:
28.4
5e3iB-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E3I_B_HISB502_0
(HISTIDINE--TRNA
LIGASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
6 / 11 THR A  83
GLU A 129
TYR A 274
TYR A 275
GLY A 295
GLY A 312
None
1.43A 5e3iB-3od1A:
28.4
5e3iB-3od1A:
25.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_H_SAMH301_0
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
5 / 12 ASP A 265
ASP A 139
THR A 311
GLY A 277
TYR A 275
None
1.39A 5hfjH-3od1A:
undetectable
5hfjH-3od1A:
18.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UMW_B_RBFB201_1
(GLYOXALASE/BLEOMYCIN
RESISANCE
PROTEIN/DIOXYGENASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 7 ARG A 102
TYR A  40
GLU A 141
ARG A 296
None
1.09A 5umwB-3od1A:
undetectable
5umwE-3od1A:
undetectable
5umwB-3od1A:
14.02
5umwE-3od1A:
14.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UMW_B_RBFB201_1
(GLYOXALASE/BLEOMYCIN
RESISANCE
PROTEIN/DIOXYGENASE)
3od1 ATP
PHOSPHORIBOSYLTRANSF
ERASE REGULATORY
SUBUNIT

(Bacillus
halodurans)
4 / 7 VAL A  77
ARG A  88
GLU A  49
LEU A 300
None
1.02A 5umwB-3od1A:
undetectable
5umwE-3od1A:
undetectable
5umwB-3od1A:
14.02
5umwE-3od1A:
14.02