SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3oft'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_A_DVAA6_0
(GRAMICIDIN A)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 ALA A 342
VAL A 340
TRP A  61
 None
None
HEM  A 417 (-4.1A)
 0.59A 1av2A-3oftA:
undetectable
1av2B-3oftA:
undetectable		 1av2A-3oftA:
19.64
1av2B-3oftA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_D_DVAD6_0
(GRAMICIDIN A)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 TRP A  61
ALA A 342
VAL A 340
 HEM  A 417 (-4.1A)
None
None
 0.50A 1av2C-3oftA:
undetectable
1av2D-3oftA:
undetectable		 1av2C-3oftA:
19.64
1av2D-3oftA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1B23_R_CYSR976_0
(CYSTEINYL TRNA
ELONGATION FACTOR TU)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 4 HIS A 335
HIS A 311
ARG A  58
ASN A 312
 None
 1.32A 1b23P-3oftA:
0.0		 1b23P-3oftA:
23.73
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1PHG_A_MYTA422_1
(CYTOCHROME P450-CAM)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 11 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.00A 1phgA-3oftA:
50.4		 1phgA-3oftA:
42.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W5U_A_DVAA6_0
(GRAMICIDIN D)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 ALA A 342
VAL A 340
TRP A  61
 None
None
HEM  A 417 (-4.1A)
 0.56A 1w5uA-3oftA:
undetectable
1w5uB-3oftA:
undetectable		 1w5uA-3oftA:
19.64
1w5uB-3oftA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W5U_B_DVAB6_0
(GRAMICIDIN D)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 TRP A  61
ALA A 342
VAL A 340
 HEM  A 417 (-4.1A)
None
None
 0.46A 1w5uA-3oftA:
undetectable
1w5uB-3oftA:
undetectable		 1w5uA-3oftA:
19.64
1w5uB-3oftA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F8L_A_SAMA400_0
(HYPOTHETICAL PROTEIN
LMO1582)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 12 HIS A  48
ALA A  51
VAL A  40
GLY A  38
PRO A 307
 None
 1.15A 2f8lA-3oftA:
undetectable		 2f8lA-3oftA:
21.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IZQ_A_DVAA6_0
(GRAMICIDIN D)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 ALA A 342
VAL A 340
TRP A  61
 None
None
HEM  A 417 (-4.1A)
 0.42A 2izqA-3oftA:
undetectable
2izqB-3oftA:
undetectable		 2izqA-3oftA:
19.64
2izqB-3oftA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IZQ_D_DVAD6_0
(GRAMICIDIN D)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 TRP A  61
ALA A 342
VAL A 340
 HEM  A 417 (-4.1A)
None
None
 0.61A 2izqC-3oftA:
undetectable
2izqD-3oftA:
undetectable		 2izqC-3oftA:
19.64
2izqD-3oftA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XZ5_C_ACHC1211_0
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 8 ASP A  13
SER A  42
TYR A 305
TRP A  30
 None
 1.11A 2xz5A-3oftA:
undetectable
2xz5C-3oftA:
undetectable		 2xz5A-3oftA:
18.78
2xz5C-3oftA:
18.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XZ5_E_ACHE1211_0
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 7 GLN A  89
ILE A 209
TRP A 219
CYH A 228
 None
 1.28A 2xz5D-3oftA:
undetectable
2xz5E-3oftA:
undetectable		 2xz5D-3oftA:
18.78
2xz5E-3oftA:
18.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_B_DVAB6_0
(GRAMICIDIN D)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 TRP A  61
ALA A 342
VAL A 340
 HEM  A 417 (-4.1A)
None
None
 0.58A 3l8lA-3oftA:
undetectable
3l8lB-3oftA:
undetectable		 3l8lA-3oftA:
19.64
3l8lB-3oftA:
3.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_D_DVAD6_0
(GRAMICIDIN D)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 TRP A  61
ALA A 342
VAL A 340
 HEM  A 417 (-4.1A)
None
None
 0.51A 3l8lC-3oftA:
undetectable
3l8lD-3oftA:
undetectable		 3l8lC-3oftA:
19.64
3l8lD-3oftA:
3.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3LXI_A_CAMA423_0
(CYTOCHROME P450)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 10 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.14A 3lxiA-3oftA:
50.0		 3lxiA-3oftA:
35.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3LXI_B_CAMB423_0
(CYTOCHROME P450)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 11 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.16A 3lxiB-3oftA:
49.9		 3lxiB-3oftA:
35.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MBG_C_ACTC800_0
(FAD-LINKED
SULFHYDRYL OXIDASE
ALR)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 ASP A 314
ARG A  53
ALA A 316
 None
 0.77A 3mbgC-3oftA:
undetectable		 3mbgC-3oftA:
15.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4C9L_A_CAMA1419_0
(CYTOCHROME P450)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 12 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.02A 4c9lA-3oftA:
50.2		 4c9lA-3oftA:
35.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4C9L_B_CAMB1419_0
(CYTOCHROME P450)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 12 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.04A 4c9lB-3oftA:
50.2		 4c9lB-3oftA:
35.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4C9O_A_CAMA423_0
(CYTOCHROME P450)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 12 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.07A 4c9oA-3oftA:
49.9		 4c9oA-3oftA:
35.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FN9_B_STRB301_1
(STEROID RECEPTOR 2)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 12 LEU A 250
ALA A 251
GLN A 257
MET A 366
ARG A 261
 None
 1.12A 4fn9B-3oftA:
undetectable		 4fn9B-3oftA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LAJ_B_ACAB512_1
(HIV-1 YU2 GP120
ENVELOPE
GLYCOPROTEIN)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 6 ARG A 328
GLY A 329
HIS A 311
ARG A 334
 None
 1.02A 4lajA-3oftA:
undetectable
4lajB-3oftA:
undetectable		 4lajA-3oftA:
19.82
4lajB-3oftA:
19.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XO7_B_ASDB402_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C2)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 7 VAL A 214
TRP A 219
ILE A 209
HIS A  94
 None
None
None
HEM  A 417 (-4.0A)
 1.11A 4xo7B-3oftA:
undetectable		 4xo7B-3oftA:
21.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5CP4_A_CAMA422_0
(CYTOCHROME P450CAM)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 9 LEU A  87
GLY A 234
THR A 238
VAL A 281
VAL A 384
 HEM  A 417 (-4.1A)
HEM  A 417 (-4.0A)
HEM  A 417 (-3.6A)
HEM  A 417 ( 4.8A)
None
 1.03A 5cp4A-3oftA:
50.6		 5cp4A-3oftA:
42.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TZO_B_7V7B201_2
(ENDO-1,4-BETA-XYLANA
SE A)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		3 / 3 ARG A 276
PRO A 321
TYR A 278
 None
 0.96A 5tzoB-3oftA:
undetectable		 5tzoB-3oftA:
17.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_E_C2FE3001_1
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 5 ASN A  45
ASP A  15
ASN A  18
ASN A 383
 None
None
None
HX2  A 397 (-3.7A)
 1.47A 5vooE-3oftA:
undetectable		 5vooE-3oftA:
25.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EU9_D_READ601_1
(RETINOIC ACID
RECEPTOR)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 7 PHE A 206
GLY A 234
LEU A 170
GLY A 167
 None
HEM  A 417 (-4.0A)
None
None
 0.75A 6eu9D-3oftA:
undetectable		 6eu9D-3oftA:
11.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EU9_D_READ601_1
(RETINOIC ACID
RECEPTOR)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		4 / 7 PHE A 206
GLY A 235
LEU A 170
GLY A 167
 None
HEM  A 417 (-3.5A)
None
None
 0.75A 6eu9D-3oftA:
undetectable		 6eu9D-3oftA:
11.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6J21_A_GBQA1201_0
(SUBSTANCE-P
RECEPTOR,ENDOLYSIN)		 3oft CYTOCHROME P450
(Novosphingobium
aromaticivorans) 		5 / 12 PRO A 145
ILE A 148
VAL A 117
PHE A 140
PHE A 358
 None
 1.28A 6j21A-3oftA:
0.4		 6j21A-3oftA:
21.56