SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3okf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1K74_A_9CRA463_2
(RETINOIC ACID
RECEPTOR RXR-ALPHA)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		3 / 3 GLN A 130
ILE A  58
HIS A  68
 None
 0.73A 1k74A-3okfA:
undetectable		 1k74A-3okfA:
22.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4L_A_TPVA403_1
(PROTEASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A  54
ILE A 131
GLY A 107
VAL A  42
ILE A  43
 None
 1.22A 2o4lA-3okfA:
undetectable		 2o4lA-3okfA:
14.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OIP_A_MTXA605_1
(CHAIN A, CRYSTAL
STRUCTURE OF DHFR)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 304
LEU A 204
THR A 276
ILE A 194
ARG A 296
 None
 1.04A 2oipA-3okfA:
undetectable		 2oipA-3okfA:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A7E_A_SAMA216_1
(CATECHOL
O-METHYLTRANSFERASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		4 / 6 GLY A 193
ILE A 194
ILE A 300
ASP A 197
 None
 0.92A 3a7eA-3okfA:
4.7		 3a7eA-3okfA:
19.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HJ3_A_MTXA605_1
(CHAIN A, CRYSTAL
STRUCTURE OF DHFR)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 304
LEU A 204
THR A 276
ILE A 194
ARG A 296
 None
 1.06A 3hj3A-3okfA:
undetectable		 3hj3A-3okfA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HJ3_B_MTXB609_1
(CHAIN A, CRYSTAL
STRUCTURE OF DHFR)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 304
LEU A 204
THR A 276
ILE A 194
ARG A 296
 None
 1.01A 3hj3B-3okfA:
undetectable		 3hj3B-3okfA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NU4_B_478B401_2
(PROTEASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 9 LEU A 298
ALA A 280
ILE A 194
GLY A 250
ILE A 297
 None
 0.87A 3nu4B-3okfA:
undetectable		 3nu4B-3okfA:
15.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QEO_B_LLTB261_1
(DEOXYCYTIDINE KINASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		4 / 7 GLU A 238
VAL A 234
GLN A 163
PHE A 161
 None
 0.95A 3qeoB-3okfA:
undetectable		 3qeoB-3okfA:
23.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SP9_B_IL2B901_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR DELTA)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 LEU A 204
VAL A 189
THR A 276
HIS A 255
LEU A 306
 None
None
None
CL  A 372 (-3.9A)
None
 1.28A 3sp9B-3okfA:
undetectable		 3sp9B-3okfA:
24.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4BUP_B_SAMB500_1
(HISTONE-LYSINE
N-METHYLTRANSFERASE
SUV420H1)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		3 / 3 HIS A 268
GLU A  77
ASN A 156
 None
NAD  A 367 (-3.0A)
NAD  A 367 ( 3.5A)
 0.60A 4bupB-3okfA:
undetectable		 4bupB-3okfA:
21.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DC3_B_2FAB401_2
(ADENOSINE KINASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		4 / 5 LEU A  60
ILE A 131
ALA A  56
PHE A  27
 None
 0.87A 4dc3B-3okfA:
undetectable		 4dc3B-3okfA:
25.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R38_A_RBFA201_1
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 256
ALA A 357
ILE A 360
LEU A 336
GLY A 250
 None
 1.05A 4r38A-3okfA:
undetectable		 4r38A-3okfA:
18.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R38_B_RBFB201_1
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 256
ALA A 357
ILE A 360
LEU A 336
GLY A 250
 None
 1.03A 4r38B-3okfA:
undetectable		 4r38B-3okfA:
18.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R38_C_RBFC201_1
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 256
ALA A 357
ILE A 360
LEU A 336
GLY A 250
 None
 1.06A 4r38C-3okfA:
undetectable		 4r38C-3okfA:
18.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R38_D_RBFD201_1
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 256
ALA A 357
ILE A 360
LEU A 336
GLY A 250
 None
 1.00A 4r38D-3okfA:
undetectable		 4r38D-3okfA:
18.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X5F_B_FOLB201_0
(DIHYDROFOLATE
REDUCTASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 ALA A 304
LEU A 204
THR A 276
ILE A 194
ARG A 296
 None
 1.14A 4x5fB-3okfA:
undetectable		 4x5fB-3okfA:
19.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YB6_C_HISC302_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 10 VAL A  42
VAL A 103
MET A  89
LEU A  73
LEU A  92
 None
 1.33A 4yb6C-3okfA:
undetectable
4yb6F-3okfA:
undetectable		 4yb6C-3okfA:
21.57
4yb6F-3okfA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YB6_D_HISD302_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 10 MET A  89
LEU A  73
LEU A  92
VAL A  42
VAL A 103
 None
 1.31A 4yb6A-3okfA:
undetectable
4yb6D-3okfA:
undetectable		 4yb6A-3okfA:
21.57
4yb6D-3okfA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YB6_E_HISE302_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 10 MET A  89
LEU A  73
LEU A  92
VAL A  42
VAL A 103
 None
 1.34A 4yb6D-3okfA:
undetectable
4yb6E-3okfA:
undetectable		 4yb6D-3okfA:
21.57
4yb6E-3okfA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DLV_A_5D5A930_0
(ECTONUCLEOTIDE
PYROPHOSPHATASE/PHOS
PHODIESTERASE FAMILY
MEMBER 2)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 12 LEU A 174
THR A  45
LEU A 106
ILE A  20
TYR A  53
 None
None
None
None
NAD  A 367 (-4.6A)
 1.00A 5dlvA-3okfA:
2.1		 5dlvA-3okfA:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M66_D_ADND502_2
(ADENOSYLHOMOCYSTEINA
SE)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		3 / 3 THR A 175
THR A 220
LEU A  26
 None
 0.66A 5m66D-3okfA:
4.0		 5m66D-3okfA:
22.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WBV_A_SAMA402_1
(HISTONE-LYSINE
N-METHYLTRANSFERASE
KMT5B)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		3 / 3 HIS A 268
GLU A  77
ASN A 156
 None
NAD  A 367 (-3.0A)
NAD  A 367 ( 3.5A)
 0.51A 5wbvA-3okfA:
undetectable		 5wbvA-3okfA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WBV_B_SAMB402_1
(HISTONE-LYSINE
N-METHYLTRANSFERASE
KMT5B)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		3 / 3 HIS A 268
GLU A  77
ASN A 156
 None
NAD  A 367 (-3.0A)
NAD  A 367 ( 3.5A)
 0.52A 5wbvB-3okfA:
undetectable		 5wbvB-3okfA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z12_B_9CRB501_2
(RETINOIC ACID
RECEPTOR RXR-ALPHA)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		3 / 3 GLN A 130
ILE A  58
HIS A  68
 None
 0.58A 5z12B-3okfA:
undetectable		 5z12B-3okfA:
13.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BKL_C_EU7C101_0
(MATRIX PROTEIN 2)		 3okf 3-DEHYDROQUINATE
SYNTHASE
(Vibrio
cholerae) 		5 / 9 ALA A 304
ALA A 187
VAL A 308
SER A 273
GLY A 269
 None
 1.15A 6bklA-3okfA:
undetectable
6bklB-3okfA:
undetectable
6bklC-3okfA:
undetectable
6bklD-3okfA:
undetectable		 6bklA-3okfA:
6.65
6bklB-3okfA:
6.65
6bklC-3okfA:
6.65
6bklD-3okfA:
6.65