SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3pdm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A7Y_A_DVAA8_0
(ACTINOMYCIN D)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		3 / 3 THR P 103
THR P 104
PRO P 102
 None
 0.82A 1a7yA-3pdmP:
undetectable		 1a7yA-3pdmP:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I3W_E_DVAE2_0
(ACTINOMYCIN D)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		3 / 3 THR P 104
PRO P 102
THR P 103
 None
 0.85A 1i3wE-3pdmP:
undetectable		 1i3wE-3pdmP:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I3W_F_DVAF8_0
(ACTINOMYCIN D)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		3 / 3 THR P 103
THR P 104
PRO P 102
 None
 0.82A 1i3wF-3pdmP:
undetectable		 1i3wF-3pdmP:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MNV_D_DVAD8_0
(ACTINOMYCIN D)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		3 / 3 THR P 103
THR P 104
PRO P 102
 None
 0.77A 1mnvD-3pdmP:
undetectable		 1mnvD-3pdmP:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OVF_B_DVAB2_0
(ACTINOMYCIN D)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		3 / 3 THR P 104
PRO P 102
THR P 103
 None
 0.86A 1ovfB-3pdmP:
undetectable		 1ovfB-3pdmP:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QFI_A_DVAA8_0
(ACTINOMYCIN X2)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		3 / 3 THR P 103
THR P 104
PRO P 102
 None
 0.80A 1qfiA-3pdmP:
undetectable		 1qfiA-3pdmP:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_B_TA1B502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gB-3pdmP:
undetectable		 3j6gB-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_D_TA1D502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gD-3pdmP:
undetectable		 3j6gD-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_F_TA1F502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gF-3pdmP:
undetectable		 3j6gF-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_H_TA1H502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gH-3pdmP:
undetectable		 3j6gH-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_J_TA1J502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gJ-3pdmP:
undetectable		 3j6gJ-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_L_TA1L502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gL-3pdmP:
undetectable		 3j6gL-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_N_TA1N502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gN-3pdmP:
undetectable		 3j6gN-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_P_TA1P502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gP-3pdmP:
undetectable		 3j6gP-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6G_R_TA1R502_1
(TUBULIN BETA CHAIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 10 VAL P  22
ASP P  21
SER P  51
PHE P  80
THR P  75
 None
 1.43A 3j6gR-3pdmP:
undetectable		 3j6gR-3pdmP:
16.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A99_C_MIYC392_1
(TETX2 PROTEIN)		 3pdm COAT PROTEIN
(Hibiscus
latent
Singapore
virus) 		5 / 12 GLU P  46
VAL P  22
ILE P  26
GLN P  47
ILE P  49
 None
 1.24A 4a99A-3pdmP:
undetectable
4a99C-3pdmP:
undetectable		 4a99A-3pdmP:
17.85
4a99C-3pdmP:
17.85