SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3pef'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7C_A_HLTA4002_1
(SERUM ALBUMIN)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		4 / 5 ARG A 250
ALA A 100
ALA A 168
LYS A 166
 None
 1.19A 1e7cA-3pefA:
undetectable		 1e7cA-3pefA:
18.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_A_FFOA1293_2
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		3 / 3 SER A  57
GLU A  56
GLU A  53
 None
 0.68A 1eqbD-3pefA:
2.5		 1eqbD-3pefA:
23.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_C_FFOC3293_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		3 / 3 SER A  57
GLU A  56
GLU A  53
 None
 0.69A 1eqbB-3pefA:
2.6		 1eqbB-3pefA:
23.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PLW_A_SAMA203_1
(RIBOSOMAL RNA
METHYLTRANSFERASE,
PUTATIVE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		3 / 3 SER A  95
ASP A  98
ASP A  67
 None
None
GOL  A 289 (-3.7A)
 0.59A 2plwA-3pefA:
5.4		 2plwA-3pefA:
18.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X9G_A_LYAA1270_2
(PTERIDINE REDUCTASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		3 / 3 MET A  12
VAL A  27
GLU A  39
 NAP  A 301 (-3.4A)
None
None
 0.92A 2x9gA-3pefA:
7.2		 2x9gA-3pefA:
26.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A66_A_ACAA601_1
(6-AMINOHEXANOATE-DIM
ER HYDROLASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 10 MET A 211
ALA A 212
ASN A 213
GLY A 209
ILE A 206
 None
GOL  A 290 (-3.7A)
None
None
GOL  A 290 ( 4.7A)
 1.21A 3a66A-3pefA:
0.0		 3a66A-3pefA:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B6R_B_CRNB603_1
(CREATINE KINASE
B-TYPE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		4 / 6 THR A  96
VAL A  97
LEU A 172
SER A 102
 NAP  A 301 (-4.1A)
None
None
None
 0.93A 3b6rB-3pefA:
undetectable		 3b6rB-3pefA:
23.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3C6G_B_VD3B700_1
(CYTOCHROME P450 2R1)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 12 ALA A  63
GLY A  77
GLU A  73
THR A 101
VAL A  97
 None
None
NAP  A 301 (-3.7A)
None
None
 1.10A 3c6gB-3pefA:
undetectable		 3c6gB-3pefA:
21.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_A_ADNA300_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 12 SER A  95
TYR A  91
GLY A 165
VAL A 164
VAL A  97
 None
None
None
EDO  A 292 (-4.7A)
None
 1.15A 3f8wA-3pefA:
undetectable		 3f8wA-3pefA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_B_ADNB301_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 12 SER A  95
TYR A  91
GLY A 165
VAL A 164
VAL A  97
 None
None
None
EDO  A 292 (-4.7A)
None
 1.14A 3f8wB-3pefA:
undetectable		 3f8wB-3pefA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_C_ADNC302_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 12 SER A  95
TYR A  91
GLY A 165
VAL A 164
VAL A  97
 None
None
None
EDO  A 292 (-4.7A)
None
 1.16A 3f8wC-3pefA:
undetectable		 3f8wC-3pefA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VWP_A_ACAA503_1
(6-AMINOHEXANOATE-DIM
ER HYDROLASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 10 MET A 211
ALA A 212
ASN A 213
GLY A 209
ILE A 206
 None
GOL  A 290 (-3.7A)
None
None
GOL  A 290 ( 4.7A)
 1.21A 3vwpA-3pefA:
0.0		 3vwpA-3pefA:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VWR_A_ACAA601_1
(6-AMINOHEXANOATE-DIM
ER HYDROLASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 11 MET A 211
ALA A 212
ASN A 213
GLY A 209
ILE A 206
 None
GOL  A 290 (-3.7A)
None
None
GOL  A 290 ( 4.7A)
 1.20A 3vwrA-3pefA:
undetectable		 3vwrA-3pefA:
22.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EMA_A_BRLA601_2
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		3 / 3 PHE A  62
VAL A 109
ILE A 105
 None
 0.62A 4emaA-3pefA:
undetectable		 4emaA-3pefA:
21.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IAQ_A_2GMA2001_1
(CHIMERA PROTEIN OF
HUMAN
5-HYDROXYTRYPTAMINE
RECEPTOR 1B AND E.
COLI SOLUBLE
CYTOCHROME B562)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 12 ALA A 137
PHE A 151
MET A  16
PHE A   6
THR A  61
 None
 1.18A 4iaqA-3pefA:
undetectable		 4iaqA-3pefA:
21.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XP4_A_COCA706_1
(DOPAMINE TRANSPORTER)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 11 ASP A  93
ALA A  71
VAL A  55
GLY A 106
GLY A  90
 None
None
CSO  A  52 ( 4.2A)
EDO  A 292 (-3.6A)
None
 1.15A 4xp4A-3pefA:
undetectable		 4xp4A-3pefA:
19.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M54_B_TA1B502_1
(TUBULIN BETA-2B
CHAIN)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 12 ASP A  93
GLU A 118
ALA A 100
ARG A 242
LEU A 172
 None
None
None
GOL  A 289 (-3.0A)
None
 1.40A 5m54B-3pefA:
undetectable		 5m54B-3pefA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6IEY_A_CLMA401_0
(ESTERASE)		 3pef 6-PHOSPHOGLUCONATE
DEHYDROGENASE,
NAD-BINDING
(Geobacter
metallireducens) 		5 / 11 ILE A 135
LEU A 161
GLY A 139
PHE A 151
ALA A 147
 None
None
EDO  A 292 ( 4.6A)
None
None
 1.21A 6ieyA-3pefA:
undetectable
6ieyB-3pefA:
undetectable		 6ieyA-3pefA:
25.00
6ieyB-3pefA:
25.00