SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3pvz'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
11GS_A_EAAA211_1
(GLUTATHIONE
S-TRANSFERASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 7 TYR A 157
VAL A 113
ILE A  95
TYR A 100
None
None
NAD  A 501 (-3.9A)
None
0.88A 11gsA-3pvzA:
undetectable
11gsA-3pvzA:
19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I9G_A_SAMA301_0
(HYPOTHETICAL PROTEIN
RV2118C)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
GLY A  42
SER A  43
ALA A  47
ASP A  94
NAD  A 501 ( 3.7A)
NAD  A 501 (-3.1A)
NAD  A 501 (-3.6A)
None
NAD  A 501 (-3.3A)
0.85A 1i9gA-3pvzA:
7.2
1i9gA-3pvzA:
18.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QAO_A_SAMA245_0
(ERMC'
METHYLTRANSFERASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
GLY A  42
ILE A  65
ASP A  94
ILE A  95
NAD  A 501 ( 3.7A)
NAD  A 501 (-3.1A)
NAD  A 501 (-4.2A)
NAD  A 501 (-3.3A)
NAD  A 501 (-3.9A)
0.65A 1qaoA-3pvzA:
5.9
1qaoA-3pvzA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T87_A_CAMA1422_0
(CYTOCHROME P450-CAM)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 7 THR A 145
LEU A  38
VAL A  63
ASP A 101
None
1.05A 1t87A-3pvzA:
undetectable
1t87A-3pvzA:
21.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GSS_A_EAAA0_1
(GLUTATHIONE
S-TRANSFERASE P1-1)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 TYR A 157
VAL A 113
ILE A  95
TYR A 100
None
None
NAD  A 501 (-3.9A)
None
0.84A 2gssA-3pvzA:
undetectable
2gssA-3pvzA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GSS_B_EAAB0_1
(GLUTATHIONE
S-TRANSFERASE P1-1)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 TYR A 157
VAL A 113
ILE A  95
TYR A 100
None
None
NAD  A 501 (-3.9A)
None
0.84A 2gssB-3pvzA:
undetectable
2gssB-3pvzA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2J2P_B_SC2B1294_1
(FICOLIN-2)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 9 GLY A 205
SER A 206
LEU A 208
SER A 203
ASP A 204
None
SCN  A 604 (-3.7A)
SCN  A 604 ( 3.9A)
NAD  A 501 (-2.9A)
None
1.27A 2j2pB-3pvzA:
undetectable
2j2pC-3pvzA:
undetectable
2j2pB-3pvzA:
18.41
2j2pC-3pvzA:
18.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_B_P1ZB1359_1
(PROSTAGLANDIN
REDUCTASE 2)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 6 THR A 328
GLU A 327
MET A 331
PHE A 255
None
1.32A 2w98B-3pvzA:
6.6
2w98B-3pvzA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BRF_A_SORA1_0
(LIN-12 AND GLP-1
PHENOTYPE PROTEIN 1,
ISOFORM A)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
3 / 3 GLY A  42
ASP A  64
SER A  66
NAD  A 501 (-3.1A)
NAD  A 501 (-2.6A)
None
0.34A 3brfA-3pvzA:
undetectable
3brfA-3pvzA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DMF_A_SAMA388_0
(PROBABLE RIBOSOMAL
RNA SMALL SUBUNIT
METHYLTRANSFERASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
GLY A  42
ALA A  47
ASP A  94
VAL A 137
NAD  A 501 ( 3.7A)
NAD  A 501 (-3.1A)
None
NAD  A 501 (-3.3A)
NAD  A 501 ( 4.6A)
0.85A 3dmfA-3pvzA:
7.6
3dmfA-3pvzA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_A_ADNA300_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 SER A 203
GLY A 238
VAL A  48
GLY A  45
VAL A 200
NAD  A 501 (-2.9A)
None
None
None
NAD  A 501 ( 3.8A)
1.10A 3f8wA-3pvzA:
undetectable
3f8wA-3pvzA:
22.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_B_ADNB301_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 SER A 203
GLY A 238
VAL A  48
GLY A  45
VAL A 200
NAD  A 501 (-2.9A)
None
None
None
NAD  A 501 ( 3.8A)
1.11A 3f8wB-3pvzA:
undetectable
3f8wB-3pvzA:
22.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F8W_C_ADNC302_1
(PURINE-NUCLEOSIDE
PHOSPHORYLASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 SER A 203
GLY A 238
VAL A  48
GLY A  45
VAL A 200
NAD  A 501 (-2.9A)
None
None
None
NAD  A 501 ( 3.8A)
1.12A 3f8wC-3pvzA:
undetectable
3f8wC-3pvzA:
22.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GSS_A_EAAA212_1
(GLUTATHIONE
S-TRANSFERASE P1-1)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 7 TYR A 157
VAL A 113
ILE A  95
TYR A 100
None
None
NAD  A 501 (-3.9A)
None
0.84A 3gssA-3pvzA:
undetectable
3gssA-3pvzA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GSS_B_EAAB211_1
(GLUTATHIONE
S-TRANSFERASE P1-1)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 7 TYR A 157
VAL A 113
ILE A  95
TYR A 100
None
None
NAD  A 501 (-3.9A)
None
0.84A 3gssB-3pvzA:
undetectable
3gssB-3pvzA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ILT_H_TRUH800_1
(GLUTAMATE RECEPTOR 2)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
3 / 3 ILE A  52
SER A  33
SER A  31
None
0.58A 3iltH-3pvzA:
undetectable
3iltH-3pvzA:
21.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_D_TFPD201_1
(PROTEIN S100-A4)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 GLY A 153
CYH A 159
CYH A 245
PHE A 247
None
0.87A 3ko0D-3pvzA:
undetectable
3ko0E-3pvzA:
1.2
3ko0D-3pvzA:
13.42
3ko0E-3pvzA:
13.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_J_TFPJ201_1
(PROTEIN S100-A4)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 GLY A 153
CYH A 159
CYH A 245
PHE A 247
None
1.03A 3ko0B-3pvzA:
undetectable
3ko0J-3pvzA:
undetectable
3ko0B-3pvzA:
13.42
3ko0J-3pvzA:
13.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N9J_A_EAAA210_1
(GLUTATHIONE
S-TRANSFERASE P)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 TYR A 157
VAL A 113
ILE A  95
TYR A 100
None
None
NAD  A 501 (-3.9A)
None
0.93A 3n9jA-3pvzA:
undetectable
3n9jA-3pvzA:
19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RV5_D_DXCD92_0
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 5 VAL A  62
GLU A 239
LYS A  54
PHE A  88
None
1.40A 3rv5C-3pvzA:
undetectable
3rv5D-3pvzA:
undetectable
3rv5C-3pvzA:
12.69
3rv5D-3pvzA:
12.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3T3R_B_9PLB501_1
(CYTOCHROME P450 2A6)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 9 PHE A 354
PHE A 140
ILE A 358
GLY A 359
PHE A 182
None
1.20A 3t3rB-3pvzA:
undetectable
3t3rB-3pvzA:
22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZS3_A_ACTA1227_0
(THAUMATIN-LIKE
PROTEIN)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 4 THR A 162
ARG A 196
ASN A 342
ILE A 253
None
1.44A 3zs3A-3pvzA:
0.0
3zs3A-3pvzA:
19.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IV0_B_SAMB302_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE,
PUTATIVE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
GLY A  42
ILE A  65
ASP A  94
ILE A  95
NAD  A 501 ( 3.7A)
NAD  A 501 (-3.1A)
NAD  A 501 (-4.2A)
NAD  A 501 (-3.3A)
NAD  A 501 (-3.9A)
0.98A 4iv0B-3pvzA:
6.8
4iv0B-3pvzA:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IV8_A_SAMA301_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE,
PUTATIVE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
6 / 12 GLY A  39
GLY A  42
ASP A  64
ILE A  65
ASP A  94
ILE A  95
NAD  A 501 ( 3.7A)
NAD  A 501 (-3.1A)
NAD  A 501 (-2.6A)
NAD  A 501 (-4.2A)
NAD  A 501 (-3.3A)
NAD  A 501 (-3.9A)
1.06A 4iv8A-3pvzA:
6.0
4iv8A-3pvzA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IV8_B_SAMB301_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE,
PUTATIVE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
6 / 12 GLY A  39
GLY A  42
ASP A  64
ILE A  65
ASP A  94
ILE A  95
NAD  A 501 ( 3.7A)
NAD  A 501 (-3.1A)
NAD  A 501 (-2.6A)
NAD  A 501 (-4.2A)
NAD  A 501 (-3.3A)
NAD  A 501 (-3.9A)
1.06A 4iv8B-3pvzA:
5.8
4iv8B-3pvzA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L4C_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 THR A 145
LEU A  38
VAL A  63
ASP A 101
None
0.96A 4l4cB-3pvzA:
undetectable
4l4cB-3pvzA:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M2X_A_TMQA202_2
(DIHYDROFOLATE
REDUCTASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
3 / 3 TRP A 367
GLN A 374
THR A 368
None
0.97A 4m2xA-3pvzA:
undetectable
4m2xA-3pvzA:
17.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NDN_C_SAMC405_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 ALA A 165
GLU A 327
ASP A 252
ILE A 253
None
0.96A 4ndnD-3pvzA:
undetectable
4ndnD-3pvzA:
22.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DPD_B_SAMB601_0
(PROTEIN LYSINE
METHYLTRANSFERASE 1)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
ASP A  64
SER A  66
ILE A  95
VAL A 137
NAD  A 501 ( 3.7A)
NAD  A 501 (-2.6A)
None
NAD  A 501 (-3.9A)
NAD  A 501 ( 4.6A)
0.95A 5dpdB-3pvzA:
7.4
5dpdB-3pvzA:
22.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWK_F_EVPF102_1
(DNA TOPOISOMERASE
2-ALPHA)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 5 GLY A  96
ASP A  94
ARG A 133
MET A 179
None
NAD  A 501 (-3.3A)
None
None
1.28A 5gwkA-3pvzA:
1.1
5gwkA-3pvzA:
17.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UIH_A_8CVA201_1
(DIHYDROFOLATE
REDUCTASE)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 8 ILE A 270
ALA A 201
LEU A   5
ILE A 265
None
SCN  A 604 ( 4.9A)
None
None
0.71A 5uihA-3pvzA:
undetectable
5uihA-3pvzA:
15.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VYH_A_FOLA409_0
(S PROTEIN)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 10 PRO A 305
HIS A 283
ALA A 223
GLY A 210
ALA A 271
None
1.28A 5vyhA-3pvzA:
undetectable
5vyhA-3pvzA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BQ4_A_ADNA401_1
(THERMOSPERMINE
SYNTHASE ACAULIS
PROTEIN)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
ASP A  64
ILE A  65
ASP A  94
ALA A 118
NAD  A 501 ( 3.7A)
NAD  A 501 (-2.6A)
NAD  A 501 (-4.2A)
NAD  A 501 (-3.3A)
NAD  A 501 (-3.4A)
1.02A 6bq4A-3pvzA:
6.7
6bq4A-3pvzA:
12.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BQ4_B_ADNB401_1
(THERMOSPERMINE
SYNTHASE ACAULIS
PROTEIN)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
5 / 12 GLY A  39
ASP A  64
ILE A  65
ASP A  94
ALA A 118
NAD  A 501 ( 3.7A)
NAD  A 501 (-2.6A)
NAD  A 501 (-4.2A)
NAD  A 501 (-3.3A)
NAD  A 501 (-3.4A)
1.02A 6bq4B-3pvzA:
6.6
6bq4B-3pvzA:
12.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6G9B_B_IXXB705_1
(ENVELOPE
GLYCOPROTEIN,ENVELOP
E GLYCOPROTEIN
ENVELOPE
GLYCOPROTEIN)
3pvz UDP-N-ACETYLGLUCOSAM
INE 4,6-DEHYDRATASE

(Aliivibrio
fischeri)
4 / 5 ALA A 154
TYR A 110
GLN A 148
ILE A 104
None
1.31A 6g9bA-3pvzA:
undetectable
6g9bB-3pvzA:
undetectable
6g9bA-3pvzA:
13.57
6g9bB-3pvzA:
12.79