SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3qdn'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E71_M_ASCM995_0
(MYROSINASE MA1)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 GLN A  72
ILE A  69
PHE A  28
PHE A  84
 None
 1.20A 1e71M-3qdnA:
undetectable		 1e71M-3qdnA:
20.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E72_M_ASCM995_0
(MYROSINASE MA1)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 GLN A  72
ILE A  69
PHE A  28
PHE A  84
 None
 1.21A 1e72M-3qdnA:
undetectable		 1e72M-3qdnA:
20.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TW4_A_CHDA131_0
(FATTY ACID-BINDING
PROTEIN)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		5 / 11 ASN A  13
ILE A   9
LEU A  61
VAL A  26
PHE A  73
 None
 1.15A 1tw4A-3qdnA:
undetectable		 1tw4A-3qdnA:
19.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QBN_A_CAMA442_0
(CYTOCHROME P450-CAM)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 PHE A  56
TYR A  52
VAL A  44
VAL A  81
 None
 0.95A 2qbnA-3qdnA:
undetectable		 2qbnA-3qdnA:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QEI_A_CXXA802_1
(TRANSPORTER)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 6 SER A  21
PHE A  28
ILE A   9
PHE A  73
 None
 1.27A 2qeiA-3qdnA:
undetectable		 2qeiA-3qdnA:
19.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HZN_G_ACTG225_0
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		3 / 3 PRO A 175
LEU A 176
GLN A 179
 None
 0.73A 3hznG-3qdnA:
undetectable
3hznH-3qdnA:
undetectable		 3hznG-3qdnA:
22.74
3hznH-3qdnA:
22.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_Q_TFPQ201_1
(PROTEIN S100-A4)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 8 GLY A  92
PHE A  93
ILE A  78
CYH A  38
 None
 0.85A 3ko0O-3qdnA:
undetectable
3ko0Q-3qdnA:
undetectable		 3ko0O-3qdnA:
16.67
3ko0Q-3qdnA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WG7_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 6 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.62A 3wg7P-3qdnA:
undetectable
3wg7W-3qdnA:
undetectable		 3wg7P-3qdnA:
21.02
3wg7W-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FOG_A_C2FA302_0
(THYMIDYLATE SYNTHASE)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		5 / 11 ILE A 102
LEU A 110
ASP A  91
GLY A  92
PHE A  93
 None
 1.40A 4fogA-3qdnA:
undetectable		 4fogA-3qdnA:
22.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MGH_A_ACTA1320_0
(PHOSPHORIBOSYLFORMYL
GLYCINAMIDINE
SYNTHASE)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 5 VAL A  81
LEU A  45
ILE A 102
LEU A 105
 None
 0.86A 4mghA-3qdnA:
undetectable		 4mghA-3qdnA:
13.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1A_C_CHDC304_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.59A 5b1aC-3qdnA:
undetectable
5b1aJ-3qdnA:
undetectable		 5b1aC-3qdnA:
21.02
5b1aJ-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1A_P_CHDP305_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.53A 5b1aP-3qdnA:
undetectable
5b1aW-3qdnA:
undetectable		 5b1aP-3qdnA:
21.02
5b1aW-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1B_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.57A 5b1bP-3qdnA:
undetectable
5b1bW-3qdnA:
undetectable		 5b1bP-3qdnA:
21.02
5b1bW-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B3S_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.58A 5b3sC-3qdnA:
undetectable
5b3sJ-3qdnA:
undetectable		 5b3sC-3qdnA:
21.02
5b3sJ-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B3S_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.55A 5b3sP-3qdnA:
undetectable		 5b3sP-3qdnA:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IY5_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.66A 5iy5C-3qdnA:
undetectable
5iy5J-3qdnA:
undetectable		 5iy5C-3qdnA:
20.41
5iy5J-3qdnA:
11.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z84_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.64A 5z84C-3qdnA:
undetectable
5z84J-3qdnA:
undetectable		 5z84C-3qdnA:
21.02
5z84J-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCQ_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 7 LEU A 236
PHE A 240
PHE A 258
LEU A 262
 None
 0.59A 5zcqP-3qdnA:
undetectable
5zcqW-3qdnA:
undetectable		 5zcqP-3qdnA:
21.02
5zcqW-3qdnA:
11.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DEB_B_MTXB303_1
(BIFUNCTIONAL PROTEIN
FOLD)		 3qdn PUTATIVE THIOREDOXIN
PROTEIN
(Salmonella
enterica) 		4 / 5 TYR A  52
GLN A  55
GLY A  92
ILE A 102
 None
 1.46A 6debB-3qdnA:
undetectable		 6debB-3qdnA:
14.69