SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3rdn'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OBW_A_SAMA602_1
(2-METHOXY-6-POLYPREN
YL-1,4-BENZOQUINOL
METHYLASE,
MITOCHONDRIAL)		 3rdn ANTIFREEZE PROTEIN
RD3 TYPE III
(Lycodichthys
dearborni) 		3 / 3 ASP A  58
ASN A  46
SER A  69
 None
 0.84A 4obwA-3rdnA:
undetectable		 4obwA-3rdnA:
15.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RJD_B_TFPB204_1
(CALMODULIN)		 3rdn ANTIFREEZE PROTEIN
RD3 TYPE III
(Lycodichthys
dearborni) 		4 / 8 LEU A  51
GLY A  52
GLU A  25
ALA A  24
 None
 0.88A 4rjdA-3rdnA:
undetectable
4rjdB-3rdnA:
undetectable		 4rjdA-3rdnA:
21.95
4rjdB-3rdnA:
21.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VW5_A_NCAA403_0
(FERREDOXIN--NADP
REDUCTASE)		 3rdn ANTIFREEZE PROTEIN
RD3 TYPE III
(Lycodichthys
dearborni) 		4 / 8 GLY A  66
GLY A  71
LEU A  72
GLU A  64
 None
 0.75A 5vw5A-3rdnA:
undetectable		 5vw5A-3rdnA:
14.44