SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3rfw'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVM_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qvmV-3rfwA:
undetectable
4qvmb-3rfwA:
undetectable
4qvmV-3rfwA:
23.13
4qvmb-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVM_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qvmH-3rfwA:
undetectable
4qvmN-3rfwA:
undetectable
4qvmH-3rfwA:
23.13
4qvmN-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVQ_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qvqV-3rfwA:
undetectable
4qvqb-3rfwA:
undetectable
4qvqV-3rfwA:
23.13
4qvqb-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVQ_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qvqH-3rfwA:
undetectable
4qvqN-3rfwA:
undetectable
4qvqH-3rfwA:
23.13
4qvqN-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVV_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 10 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.36A 4qvvH-3rfwA:
undetectable
4qvvN-3rfwA:
undetectable
4qvvH-3rfwA:
23.13
4qvvN-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVW_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 4qvwV-3rfwA:
undetectable
4qvwb-3rfwA:
undetectable
4qvwV-3rfwA:
23.13
4qvwb-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVW_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 4qvwH-3rfwA:
undetectable
4qvwN-3rfwA:
undetectable
4qvwH-3rfwA:
23.13
4qvwN-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW0_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 4qw0V-3rfwA:
undetectable
4qw0b-3rfwA:
undetectable
4qw0V-3rfwA:
23.13
4qw0b-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW0_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 4qw0H-3rfwA:
undetectable
4qw0N-3rfwA:
undetectable
4qw0H-3rfwA:
23.13
4qw0N-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW1_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qw1V-3rfwA:
undetectable
4qw1b-3rfwA:
undetectable
4qw1V-3rfwA:
23.13
4qw1b-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW1_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 4qw1H-3rfwA:
undetectable
4qw1N-3rfwA:
undetectable
4qw1H-3rfwA:
23.13
4qw1N-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW3_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qw3V-3rfwA:
undetectable
4qw3b-3rfwA:
undetectable
4qw3V-3rfwA:
23.13
4qw3b-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW3_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.35A 4qw3H-3rfwA:
undetectable
4qw3N-3rfwA:
undetectable
4qw3H-3rfwA:
23.13
4qw3N-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CZ7_B_BO2B201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 9 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 5cz7V-3rfwA:
0.0
5cz7b-3rfwA:
undetectable
5cz7V-3rfwA:
23.13
5cz7b-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CZ7_N_BO2N201_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-1)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 11 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.34A 5cz7H-3rfwA:
undetectable
5cz7N-3rfwA:
undetectable
5cz7H-3rfwA:
23.13
5cz7N-3rfwA:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LF3_B_BO2B305_1
(PROTEASOME SUBUNIT
BETA TYPE-6)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 12 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.33A 5lf3b-3rfwA:
undetectable
5lf3b-3rfwA:
20.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LF3_N_BO2N304_1
(PROTEASOME SUBUNIT
BETA TYPE-6)
3rfw CELL-BINDING FACTOR
2

(Campylobacter
jejuni)
5 / 12 THR A 209
THR A 211
THR A 212
THR A 213
ALA A 201
None
1.33A 5lf3N-3rfwA:
undetectable
5lf3N-3rfwA:
20.59