SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3rit'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I00_A_D16A315_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 9 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.45A 1i00A-3ritA:
undetectable		 1i00A-3ritA:
22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I00_B_D16B409_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 9 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.39A 1i00B-3ritA:
undetectable		 1i00B-3ritA:
22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QHY_A_CLMA888_0
(CHLORAMPHENICOL
PHOSPHOTRANSFERASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		4 / 6 PRO A 140
ALA A 146
GLU A 150
GLU A 147
 None
 1.24A 1qhyA-3ritA:
undetectable		 1qhyA-3ritA:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2TSR_C_D16C509_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 10 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.49A 2tsrC-3ritA:
undetectable		 2tsrC-3ritA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2TSR_D_D16D609_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 9 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.42A 2tsrD-3ritA:
undetectable		 2tsrD-3ritA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X2N_A_X2NA1480_1
(LANOSTEROL
14-ALPHA-DEMETHYLASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 12 PRO A 247
ALA A 248
ALA A 305
ALA A 309
THR A 315
 SO4  A 358 (-3.8A)
SO4  A 358 (-3.1A)
None
None
None
 1.31A 2x2nA-3ritA:
undetectable		 2x2nA-3ritA:
22.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X7H_A_PFNA1374_1
(ZINC-BINDING ALCOHOL
DEHYDROGENASE
DOMAIN-CONTAINING
PROTEIN 2)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		4 / 6 PRO A 191
SER A 194
GLU A 167
TYR A 195
 None
 1.49A 2x7hA-3ritA:
undetectable		 2x7hA-3ritA:
21.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GWX_B_EPAB3_2
(PROTEIN (PEROXISOME
PROLIFERATOR
ACTIVATED RECEPTOR
(PPAR-DELTA)))		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 12 LEU A 210
LEU A 159
VAL A 161
VAL A 187
LEU A 181
 None
 1.06A 3gwxB-3ritA:
undetectable		 3gwxB-3ritA:
23.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HEC_A_STIA1_2
(MITOGEN-ACTIVATED
PROTEIN KINASE 14)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		4 / 4 LEU A  42
MET A  75
ILE A 300
ASP A 104
 None
 1.04A 3hecA-3ritA:
undetectable		 3hecA-3ritA:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KEE_B_30BB500_1
(GENOME POLYPROTEIN)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 12 ASP A 104
VAL A 344
GLY A 349
ALA A 304
ALA A 303
 None
 1.05A 3keeB-3ritA:
undetectable		 3keeB-3ritA:
19.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UUD_A_ESTA600_1
(ESTROGEN RECEPTOR)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 11 LEU A 306
ALA A 308
LEU A 123
GLY A 349
LEU A 350
 None
 1.26A 3uudA-3ritA:
undetectable		 3uudA-3ritA:
19.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DJE_A_C2FA300_0
(5-METHYLTETRAHYDROFO
LATE CORRINOID/IRON
SULFUR PROTEIN
METHYLTRANSFERASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 12 GLU A 213
LEU A 200
ASP A 204
ARG A 316
ILE A 212
 None
 1.39A 4djeA-3ritA:
9.8		 4djeA-3ritA:
22.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EB4_C_D16C402_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 9 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.44A 4eb4C-3ritA:
undetectable		 4eb4C-3ritA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EB4_D_D16D402_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 10 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.43A 4eb4D-3ritA:
undetectable		 4eb4D-3ritA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FEX_D_KAND301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 10 ASP A 190
ASP A 241
ASP A 321
CYH A 294
GLU A 242
 MG  A 365 ( 2.7A)
MG  A 365 ( 3.8A)
ARG  A 363 (-3.5A)
ARG  A 363 (-3.8A)
MG  A 365 ( 3.1A)
 1.41A 4fexD-3ritA:
0.0		 4fexD-3ritA:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XDQ_A_BEZA306_0
(GLYCOSIDE HYDROLASE
FAMILY PROTEIN)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		3 / 3 ARG A 223
ASP A 225
TRP A 226
 None
 1.00A 4xdqA-3ritA:
undetectable		 4xdqA-3ritA:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DXB_A_ESTA1000_1
(ESTROGEN RECEPTOR)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 10 LEU A 306
ALA A 308
LEU A 123
GLY A 349
LEU A 350
 None
 1.25A 5dxbA-3ritA:
undetectable		 5dxbA-3ritA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOP_A_C2FA3001_1
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		3 / 3 ASP A 241
ASN A 264
ASP A 319
 MG  A 365 ( 3.8A)
None
ARG  A 363 (-3.0A)
 0.85A 5vopA-3ritA:
8.9		 5vopA-3ritA:
25.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOP_B_C2FB3001_1
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		3 / 3 ASP A 241
ASN A 264
ASP A 319
 MG  A 365 ( 3.8A)
None
ARG  A 363 (-3.0A)
 0.81A 5vopB-3ritA:
8.8		 5vopB-3ritA:
25.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X5Q_D_D16D402_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 8 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.42A 5x5qD-3ritA:
undetectable		 5x5qD-3ritA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X66_C_MTXC402_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 9 ILE A 302
LEU A 350
PHE A 335
MET A 105
ALA A 106
 None
 1.23A 5x66C-3ritA:
undetectable		 5x66C-3ritA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X66_C_MTXC402_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 9 ILE A 302
LEU A 352
GLY A 333
PHE A 335
TYR A 354
 None
 1.39A 5x66C-3ritA:
undetectable		 5x66C-3ritA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X66_F_MTXF402_1
(THYMIDYLATE SYNTHASE)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		5 / 12 ILE A 302
LEU A 350
PHE A 335
MET A 105
ALA A 106
 None
 1.13A 5x66F-3ritA:
undetectable		 5x66F-3ritA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CB4_A_BEZA501_0
(CANAVALIN)		 3rit DIPEPTIDE EPIMERASE
(Methylococcus
capsulatus) 		4 / 8 LEU A 181
VAL A 161
LEU A 159
ILE A 136
 None
 0.95A 6cb4A-3ritA:
undetectable		 6cb4A-3ritA:
22.32