SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3rmh'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U9F_D_CLMD221_0
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
5 / 12 PHE A 696
LEU A 706
VAL A 655
PHE A 685
CYH A 726
None
1.24A 3u9fD-3rmhA:
undetectable
3u9fE-3rmhA:
undetectable
3u9fD-3rmhA:
20.56
3u9fE-3rmhA:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U9F_G_CLMG221_0
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
5 / 12 PHE A 696
LEU A 706
VAL A 655
PHE A 685
CYH A 726
None
1.26A 3u9fG-3rmhA:
undetectable
3u9fH-3rmhA:
undetectable
3u9fG-3rmhA:
20.56
3u9fH-3rmhA:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U9F_S_CLMS221_0
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
5 / 12 PHE A 685
CYH A 726
PHE A 696
LEU A 706
VAL A 655
None
1.24A 3u9fP-3rmhA:
undetectable
3u9fS-3rmhA:
undetectable
3u9fP-3rmhA:
20.56
3u9fS-3rmhA:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X7P_A_ACRA1481_1
(GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
4 / 6 SER A 722
ARG A 652
GLU A 650
TYR A 675
None
1.28A 5x7pA-3rmhA:
undetectable
5x7pA-3rmhA:
7.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X7Q_A_ACRA1481_1
(GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
4 / 6 SER A 722
ARG A 652
GLU A 650
TYR A 675
None
1.25A 5x7qA-3rmhA:
undetectable
5x7qA-3rmhA:
7.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X7Q_B_ACRB1481_1
(GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
4 / 6 SER A 722
ARG A 652
GLU A 650
TYR A 675
None
1.31A 5x7qB-3rmhA:
undetectable
5x7qB-3rmhA:
7.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X7R_A_ACRA1481_1
(GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
4 / 6 SER A 722
ARG A 652
GLU A 650
TYR A 675
None
1.24A 5x7rA-3rmhA:
undetectable
5x7rA-3rmhA:
7.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X7R_B_ACRB1481_1
(GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE)
3rmh YEAST CDC13 OB4
([Candida]
glabrata)
4 / 6 SER A 722
ARG A 652
GLU A 650
TYR A 675
None
1.32A 5x7rB-3rmhA:
undetectable
5x7rB-3rmhA:
7.58