SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3s7x'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8X_A_NIMA701_2
(PROSTAGLANDIN G/H
SYNTHASE 1)
3s7x MAJOR CAPSID PROTEIN
VP1

(Human
polyomavirus
4)
3 / 3 VAL A 100
SER A  98
LEU A  54
None
0.72A 3n8xA-3s7xA:
undetectable
3n8xA-3s7xA:
16.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WXO_A_NIZA803_1
(CATALASE-PEROXIDASE)
3s7x MAJOR CAPSID PROTEIN
VP1

(Human
polyomavirus
4)
4 / 4 ASP A 268
THR A 279
VAL A 237
SER A 282
None
1.33A 3wxoA-3s7xA:
undetectable
3wxoA-3s7xA:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KF9_A_ACTA407_0
(GLUTATHIONE
S-TRANSFERASE
PROTEIN)
3s7x MAJOR CAPSID PROTEIN
VP1

(Human
polyomavirus
4)
3 / 3 GLU A 123
ARG A 286
HIS A 288
None
0.83A 4kf9A-3s7xA:
undetectable
4kf9A-3s7xA:
23.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N5D_B_SAMB303_1
(METHYLTRANSFERASE)
3s7x MAJOR CAPSID PROTEIN
VP1

(Human
polyomavirus
4)
4 / 7 GLY A 254
GLU A 118
ARG A 121
ASP A 249
None
1.07A 5n5dB-3s7xA:
undetectable
5n5dB-3s7xA:
24.38