SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ssq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N9J_B_EAAB214_1
(GLUTATHIONE
S-TRANSFERASE P)		 3ssq CARBON DIOXIDE
CONCENTRATING
MECHANISM PROTEIN
(Thermosynechococ
cus
elongatus) 		4 / 8 VAL A  53
GLY A   6
ILE A  91
GLY A  48
 None
 0.81A 3n9jB-3ssqA:
undetectable		 3n9jB-3ssqA:
20.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z2E_F_TR6F101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
SYMMETRIZED E-SITE
DNA)		 3ssq CARBON DIOXIDE
CONCENTRATING
MECHANISM PROTEIN
(Thermosynechococ
cus
elongatus) 		4 / 5 GLY A  40
ARG A  11
GLY A  12
GLU A  71
 None
 1.21A 4z2eB-3ssqA:
undetectable
4z2eC-3ssqA:
undetectable		 4z2eB-3ssqA:
13.44
4z2eC-3ssqA:
21.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YSI_A_NCAA1001_0
(UBIQUITINATING/DEUBI
QUITINATING ENZYME
SDEA)		 3ssq CARBON DIOXIDE
CONCENTRATING
MECHANISM PROTEIN
(Thermosynechococ
cus
elongatus) 		4 / 6 ARG A  11
GLY A  40
THR A  10
VAL A  42
 None
 1.06A 5ysiA-3ssqA:
undetectable		 5ysiA-3ssqA:
22.29