SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3t4r'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OHT_A_1N1A2000_1
(P38A)
3t4r PHOSPHOPROTEIN
(Lettuce
necrotic
yellows
cytorhabdovirus)
5 / 12 ASP A  37
VAL A  30
ILE A  22
ILE A  54
ALA A  40
None
1.19A 3ohtA-3t4rA:
undetectable
3ohtB-3t4rA:
undetectable
3ohtA-3t4rA:
11.20
3ohtB-3t4rA:
11.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_A_ACTA502_0
(RNA-DEPENDENT RNA
POLYMERASE)
3t4r PHOSPHOPROTEIN
(Lettuce
necrotic
yellows
cytorhabdovirus)
4 / 5 LYS A  10
LEU A  11
GLU A   7
LEU A  39
None
1.38A 4k4yA-3t4rA:
undetectable
4k4yA-3t4rA:
11.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_E_ACTE503_0
(RNA-DEPENDENT RNA
POLYMERASE)
3t4r PHOSPHOPROTEIN
(Lettuce
necrotic
yellows
cytorhabdovirus)
4 / 4 LYS A  10
LEU A  11
GLU A   7
LEU A  39
None
1.40A 4k4yE-3t4rA:
undetectable
4k4yE-3t4rA:
11.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PEV_B_ADNB501_2
(MEMBRANE LIPOPROTEIN
FAMILY PROTEIN)
3t4r PHOSPHOPROTEIN
(Lettuce
necrotic
yellows
cytorhabdovirus)
3 / 3 PRO A  48
LEU A  46
GLN A  55
None
0.68A 4pevB-3t4rA:
undetectable
4pevB-3t4rA:
10.59