SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3t7v'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PJ7_A_FFOA2887_1
(N,N-DIMETHYLGLYCINE
OXIDASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
3 / 3 ASP A 279
THR A 298
GLU A 205
MD0  A 993 (-3.6A)
MD0  A 993 (-3.4A)
None
0.71A 1pj7A-3t7vA:
undetectable
1pj7A-3t7vA:
18.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VID_A_SAMA301_1
(CATECHOL
O-METHYLTRANSFERASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 5 SER A 222
GLU A 171
TYR A 169
SER A  76
None
SAM  A 992 (-2.8A)
SAM  A 992 ( 4.6A)
None
1.44A 1vidA-3t7vA:
undetectable
1vidA-3t7vA:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ZGY_A_BRLA503_1
(PEROXISOME
PROLIFERATOR
ACTIVATED RECEPTOR
GAMMA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 PHE A  64
SER A 305
TYR A  89
LEU A  91
LEU A 113
MD0  A 993 (-3.7A)
None
None
None
None
1.28A 1zgyA-3t7vA:
undetectable
1zgyA-3t7vA:
21.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XZ5_C_ACHC1211_0
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 8 THR A  99
SER A 305
TYR A  66
TYR A  89
None
1.32A 2xz5A-3t7vA:
undetectable
2xz5C-3t7vA:
undetectable
2xz5A-3t7vA:
20.45
2xz5C-3t7vA:
20.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZVJ_A_SAMA301_1
(CATECHOL
O-METHYLTRANSFERASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 6 SER A 222
GLU A 171
TYR A 169
SER A  76
None
SAM  A 992 (-2.8A)
SAM  A 992 ( 4.6A)
None
1.40A 2zvjA-3t7vA:
undetectable
2zvjA-3t7vA:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DEU_B_SALB306_1
(TRANSCRIPTIONAL
REGULATOR SLYA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 6 THR A 219
SER A 257
LEU A 256
THR A 210
None
0.93A 3deuB-3t7vA:
undetectable
3deuB-3t7vA:
18.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IV6_C_SAMC301_0
(PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 ARG A 340
GLY A 107
ASP A 323
ILE A 300
LEU A  61
None
1.28A 3iv6C-3t7vA:
undetectable
3iv6C-3t7vA:
22.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUF_B_SUEB1201_2
(NS3 PROTEASE, NS4A
PROTEIN)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
3 / 3 TYR A  54
LEU A  61
ARG A  51
None
0.81A 3sufB-3t7vA:
undetectable
3sufB-3t7vA:
21.22
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3T7V_A_SAMA992_0
(METHYLORNITHINE
SYNTHASE PYLB)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
6 / 12 THR A 114
GLY A 116
GLY A 148
TYR A 169
ARG A 190
MET A 237
MD0  A 993 (-4.0A)
SF4  A 991 ( 3.7A)
SAM  A 992 ( 3.8A)
SAM  A 992 ( 4.6A)
SAM  A 992 (-3.3A)
MD0  A 993 (-3.9A)
1.03A 3t7vA-3t7vA:
63.9
3t7vA-3t7vA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3T7V_A_SAMA992_0
(METHYLORNITHINE
SYNTHASE PYLB)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
12 / 12 THR A 114
GLY A 116
GLY A 148
TYR A 169
GLU A 171
ARG A 182
ARG A 190
LEU A 209
MET A 237
GLN A 242
VAL A 310
ALA A 311
MD0  A 993 (-4.0A)
SF4  A 991 ( 3.7A)
SAM  A 992 ( 3.8A)
SAM  A 992 ( 4.6A)
SAM  A 992 (-2.8A)
SAM  A 992 ( 2.7A)
SAM  A 992 (-3.3A)
SAM  A 992 (-4.8A)
MD0  A 993 (-3.9A)
SAM  A 992 (-4.2A)
SAM  A 992 (-3.7A)
SAM  A 992 ( 3.8A)
0.03A 3t7vA-3t7vA:
63.9
3t7vA-3t7vA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V81_A_NVPA901_1
(HIV-1 REVERSE
TRANSCRIPTASE P66
SUBUNIT)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 8 LEU A 166
LYS A 198
LEU A 155
TYR A 202
None
1.07A 3v81A-3t7vA:
undetectable
3v81A-3t7vA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DX5_B_MIYB1103_1
(ACRIFLAVINE
RESISTANCE PROTEIN B)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 GLY A 285
ASP A 279
ALA A 276
VAL A 297
ARG A 322
None
MD0  A 993 (-3.6A)
None
None
None
0.89A 4dx5B-3t7vA:
undetectable
4dx5B-3t7vA:
17.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J24_A_ESTA600_1
(ESTROGEN RECEPTOR
BETA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 LEU A 209
GLU A 171
MET A 226
ILE A 262
ILE A 274
SAM  A 992 (-4.8A)
SAM  A 992 (-2.8A)
None
None
None
1.12A 4j24A-3t7vA:
undetectable
4j24A-3t7vA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J24_B_ESTB600_1
(ESTROGEN RECEPTOR
BETA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 LEU A 209
GLU A 171
MET A 226
ILE A 262
ILE A 274
SAM  A 992 (-4.8A)
SAM  A 992 (-2.8A)
None
None
None
1.08A 4j24B-3t7vA:
undetectable
4j24B-3t7vA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J24_C_ESTC600_1
(ESTROGEN RECEPTOR
BETA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 LEU A 209
GLU A 171
MET A 226
ILE A 262
ILE A 274
SAM  A 992 (-4.8A)
SAM  A 992 (-2.8A)
None
None
None
1.11A 4j24C-3t7vA:
undetectable
4j24C-3t7vA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J26_B_ESTB600_1
(ESTROGEN RECEPTOR
BETA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 LEU A 209
GLU A 171
MET A 226
ILE A 262
ILE A 274
SAM  A 992 (-4.8A)
SAM  A 992 (-2.8A)
None
None
None
1.06A 4j26B-3t7vA:
undetectable
4j26B-3t7vA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P6X_I_HCYI900_2
(GLUCOCORTICOID
RECEPTOR)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
3 / 3 MET A 150
MET A 144
TYR A 121
None
MD0  A 993 ( 4.5A)
None
1.25A 4p6xI-3t7vA:
undetectable
4p6xI-3t7vA:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4U95_B_MIYB1102_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 GLY A 285
ASP A 279
ALA A 276
VAL A 297
ARG A 322
None
MD0  A 993 (-3.6A)
None
None
None
0.92A 4u95B-3t7vA:
undetectable
4u95B-3t7vA:
17.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UHX_A_LZUA3008_1
(ALDEHYDE OXIDASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 8 GLU A 117
ASP A 118
ARG A  90
PRO A 147
None
1.14A 4uhxA-3t7vA:
undetectable
4uhxA-3t7vA:
13.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UHX_A_RTZA3009_1
(ALDEHYDE OXIDASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 8 GLU A 117
ASP A 118
ARG A  90
PRO A 147
None
1.14A 4uhxA-3t7vA:
undetectable
4uhxA-3t7vA:
13.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YMG_B_SAMB1001_1
(PUTATIVE
SAM-DEPENDENT
O-METHYLTRANFERASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
3 / 3 SER A 277
GLU A 171
GLU A 117
MD0  A 993 (-2.6A)
SAM  A 992 (-2.8A)
None
0.76A 4ymgB-3t7vA:
undetectable
4ymgB-3t7vA:
19.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BS8_G_MFXG101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
TTACGTGCATAGTCATTCAT
GACC)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 7 ARG A  48
ARG A 289
THR A 238
GLU A 258
None
0.74A 5bs8A-3t7vA:
undetectable
5bs8C-3t7vA:
undetectable
5bs8D-3t7vA:
undetectable
5bs8A-3t7vA:
24.86
5bs8C-3t7vA:
24.86
5bs8D-3t7vA:
23.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTA_G_MFXG101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
TTACGTGCATAGTCATTCAT
GACC)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 7 ARG A  48
ARG A 289
THR A 238
GLU A 258
None
0.74A 5btaA-3t7vA:
undetectable
5btaC-3t7vA:
undetectable
5btaD-3t7vA:
undetectable
5btaA-3t7vA:
24.86
5btaC-3t7vA:
24.86
5btaD-3t7vA:
23.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTA_H_MFXH101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
GGTCATGAATGACTATGCAC
GTAA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 6 ARG A 289
THR A 238
GLU A 258
ARG A  48
None
0.74A 5btaA-3t7vA:
undetectable
5btaB-3t7vA:
undetectable
5btaC-3t7vA:
undetectable
5btaA-3t7vA:
24.86
5btaB-3t7vA:
23.90
5btaC-3t7vA:
24.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTC_G_CPFG102_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
TTACGTGCATAGTCATTCAT
GACC)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 6 ARG A 289
THR A 238
GLU A 258
ARG A  48
None
0.76A 5btcA-3t7vA:
undetectable
5btcB-3t7vA:
undetectable
5btcC-3t7vA:
undetectable
5btcA-3t7vA:
24.86
5btcB-3t7vA:
23.90
5btcC-3t7vA:
24.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTF_F_GFNF101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
TTACGTGCATAGTCATTCAT
GACC)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 7 ARG A 289
THR A 238
GLU A 258
ARG A  48
None
0.79A 5btfA-3t7vA:
undetectable
5btfB-3t7vA:
undetectable
5btfC-3t7vA:
undetectable
5btfA-3t7vA:
24.86
5btfB-3t7vA:
23.90
5btfC-3t7vA:
24.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTG_E_LFXE101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
GGTCATGAATGACTATGCAC
GTAA)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 6 ARG A 289
THR A 238
GLU A 258
ARG A  48
None
0.73A 5btgA-3t7vA:
undetectable
5btgB-3t7vA:
undetectable
5btgC-3t7vA:
undetectable
5btgA-3t7vA:
24.86
5btgB-3t7vA:
23.90
5btgC-3t7vA:
24.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTG_F_LFXF101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
TTACGTGCATAGTCATTCAT
GACC)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 7 ARG A  48
ARG A 289
THR A 238
GLU A 258
None
0.89A 5btgA-3t7vA:
undetectable
5btgC-3t7vA:
undetectable
5btgD-3t7vA:
undetectable
5btgA-3t7vA:
24.86
5btgC-3t7vA:
24.86
5btgD-3t7vA:
23.90
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5FEP_A_SAMA407_0
([FEFE] HYDROGENASE
MATURASE SUBUNIT
HYDE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 CYH A  78
GLY A 148
LEU A 168
ARG A 190
TYR A  66
SF4  A 991 (-2.3A)
SAM  A 992 ( 3.8A)
None
SAM  A 992 (-3.3A)
None
0.83A 5fepA-3t7vA:
38.3
5fepA-3t7vA:
30.49
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5FEP_A_SAMA407_0
([FEFE] HYDROGENASE
MATURASE SUBUNIT
HYDE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 CYH A  78
SER A 146
GLY A 148
LEU A 168
ARG A 190
SF4  A 991 (-2.3A)
MD0  A 993 (-2.8A)
SAM  A 992 ( 3.8A)
None
SAM  A 992 (-3.3A)
0.51A 5fepA-3t7vA:
38.3
5fepA-3t7vA:
30.49
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5FES_A_SAMA408_0
([FEFE] HYDROGENASE
MATURASE SUBUNIT
HYDE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 CYH A  78
GLY A 148
LEU A 168
ARG A 190
TYR A  66
SF4  A 991 (-2.3A)
SAM  A 992 ( 3.8A)
None
SAM  A 992 (-3.3A)
None
0.80A 5fesA-3t7vA:
38.5
5fesA-3t7vA:
30.49
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5FES_A_SAMA408_0
([FEFE] HYDROGENASE
MATURASE SUBUNIT
HYDE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
5 / 12 CYH A  78
SER A 146
GLY A 148
LEU A 168
ARG A 190
SF4  A 991 (-2.3A)
MD0  A 993 (-2.8A)
SAM  A 992 ( 3.8A)
None
SAM  A 992 (-3.3A)
0.51A 5fesA-3t7vA:
38.5
5fesA-3t7vA:
30.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FHR_A_SAMA303_1
(CATECHOL
O-METHYLTRANSFERASE)
3t7v METHYLORNITHINE
SYNTHASE PYLB

(Methanosarcina
barkeri)
4 / 5 SER A 222
GLU A 171
TYR A 169
SER A  76
None
SAM  A 992 (-2.8A)
SAM  A 992 ( 4.6A)
None
1.44A 5fhrA-3t7vA:
undetectable
5fhrA-3t7vA:
22.73