SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3tfj'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7W_B_MTXB301_1
(PTERIDINE REDUCTASE)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 11 SER A 126
PHE A 131
LEU A 275
LEU A  76
HIS A 139
GOL  A 372 ( 4.9A)
None
None
None
None
1.32A 1e7wB-3tfjA:
undetectable
1e7wB-3tfjA:
18.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1LQT_B_ACTB1873_0
(FPRA)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
3 / 3 ASP A 271
ASP A  84
LYS A 277
None
1.15A 1lqtB-3tfjA:
undetectable
1lqtB-3tfjA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1LQU_B_ACTB1430_0
(FPRA)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
3 / 3 ASP A 271
ASP A  84
LYS A 277
None
1.12A 1lquB-3tfjA:
undetectable
1lquB-3tfjA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WG8_A_SAMA3142_0
(PREDICTED
S-ADENOSYLMETHIONINE
-DEPENDENT
METHYLTRANSFERASE)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 12 GLY A 202
GLY A 201
GLY A 157
PHE A 168
SER A 195
None
None
None
None
THG  A 370 ( 4.4A)
1.16A 1wg8A-3tfjA:
undetectable
1wg8A-3tfjA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AOU_B_CQAB401_0
(HISTAMINE
N-METHYLTRANSFERASE)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 7 GLY A 261
PHE A 262
PRO A 257
ASP A 255
None
1.19A 2aouB-3tfjA:
undetectable
2aouB-3tfjA:
24.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2KOT_B_ANWB99_0
(PROTEIN S100-A13)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 8 ALA A  39
VAL A  26
THR A  27
PHE A  41
None
1.12A 2kotB-3tfjA:
undetectable
2kotB-3tfjA:
14.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_A_KLNA1501_1
(CYTOCHROME P450 3A4)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 10 ILE A 302
PHE A 368
LEU A 244
ILE A 299
GLY A 294
None
None
THG  A 370 ( 4.8A)
None
None
1.33A 2v0mA-3tfjA:
undetectable
2v0mA-3tfjA:
20.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EM0_A_CHDA150_0
(ILEAL BILE
ACID-BINDING PROTEIN)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 12 VAL A  55
VAL A  26
ILE A  21
TYR A 217
GLN A  24
None
1.47A 3em0A-3tfjA:
undetectable
3em0A-3tfjA:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_N_TFPN201_1
(PROTEIN S100-A4)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 10 GLY A 248
PHE A 251
GLY A 306
ILE A 240
PHE A 262
None
1.49A 3ko0L-3tfjA:
undetectable
3ko0N-3tfjA:
undetectable
3ko0L-3tfjA:
16.49
3ko0N-3tfjA:
16.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MEC_A_65BA561_0
(P66 REVERSE
TRANSCRIPTASE)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 12 VAL A 229
VAL A 223
GLY A 224
PRO A 231
TYR A 217
None
1.30A 3mecA-3tfjA:
2.9
3mecA-3tfjA:
20.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q70_A_RITA2001_2
(CANDIDAPEPSIN-2)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 6 SER A 122
ILE A 152
TYR A 206
ASP A 181
THG  A 370 (-3.8A)
None
None
None
0.90A 3q70A-3tfjA:
undetectable
3q70A-3tfjA:
23.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QEL_B_QELB1_1
(NMDA GLUTAMATE
RECEPTOR SUBUNIT
GLUTAMATE [NMDA]
RECEPTOR SUBUNIT
EPSILON-2)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 11 TYR A 217
ALA A 154
ILE A 155
THR A  30
PRO A  38
None
1.48A 3qelA-3tfjA:
undetectable
3qelB-3tfjA:
undetectable
3qelA-3tfjA:
21.36
3qelB-3tfjA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KIC_B_SAMB401_0
(METHYLTRANSFERASE
MPPJ)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 12 ILE A 297
ILE A 336
ALA A 337
ALA A 243
ARG A 239
None
1.03A 4kicB-3tfjA:
undetectable
4kicB-3tfjA:
21.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LBG_A_ADNA402_1
(PROBABLE SUGAR
KINASE PROTEIN)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 10 THR A 305
SER A 303
ALA A 324
ILE A 297
ILE A 354
None
1.05A 4lbgA-3tfjA:
undetectable
4lbgA-3tfjA:
19.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EWJ_D_QELD503_1
(NMDA GLUTAMATE
RECEPTOR SUBUNIT
GLUTAMATE RECEPTOR
IONOTROPIC, NMDA 2B)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
5 / 12 TYR A 217
ALA A 154
ILE A 155
THR A  30
PRO A  38
None
1.49A 5ewjC-3tfjA:
undetectable
5ewjD-3tfjA:
undetectable
5ewjC-3tfjA:
21.50
5ewjD-3tfjA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EW0_B_TA1B501_2
(TUBULIN BETA CHAIN)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 5 LEU A  36
THR A  27
PRO A 234
ARG A 239
None
1.27A 6ew0B-3tfjA:
undetectable
6ew0B-3tfjA:
12.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EW0_D_TA1D501_2
(TUBULIN BETA CHAIN)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 5 LEU A  36
THR A  27
PRO A 234
ARG A 239
None
1.27A 6ew0D-3tfjA:
undetectable
6ew0D-3tfjA:
12.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EW0_H_TA1H501_2
(TUBULIN BETA CHAIN)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 5 LEU A  36
THR A  27
PRO A 234
ARG A 239
None
1.27A 6ew0H-3tfjA:
undetectable
6ew0H-3tfjA:
12.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EW0_I_TA1I501_2
(TUBULIN BETA CHAIN)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 5 LEU A  36
THR A  27
PRO A 234
ARG A 239
None
1.27A 6ew0I-3tfjA:
undetectable
6ew0I-3tfjA:
12.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FBN_B_SAMB401_0
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 7 ALA A 337
ASP A 298
ILE A 297
ILE A 354
None
0.94A 6fbnA-3tfjA:
undetectable
6fbnA-3tfjA:
19.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6HZP_A_FVTA501_0
(PEPTIDE ABC
TRANSPORTER PERMEASE)
3tfj GCVT-LIKE
AMINOMETHYLTRANSFERA
SE PROTEIN

(Candidatus
Pelagibacter
ubique)
4 / 8 VAL A 106
ASN A 107
ASN A  33
ILE A 123
None
1.08A 6hzpA-3tfjA:
undetectable
6hzpA-3tfjA:
23.39