SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3u0b'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HO5_B_ADNB2604_1
(5'-NUCLEOTIDASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 10 ASN A 438
SER A 155
GLY A 187
ARG A 142
PHE A 190
 None
 1.19A 1ho5B-3u0bA:
1.6		 1ho5B-3u0bA:
24.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1M4D_B_TOYB501_1
(AMINOGLYCOSIDE
2'-N-ACETYLTRANSFERA
SE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 9 ASP A 204
GLU A 171
SER A 179
ALA A 180
ASP A  63
 None
 1.37A 1m4dB-3u0bA:
0.0		 1m4dB-3u0bA:
17.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UAY_A_ADNA1001_1
(TYPE II
3-HYDROXYACYL-COA
DEHYDROGENASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		7 / 11 GLY A 216
ALA A 218
ASP A 240
ASP A 263
VAL A 264
ALA A 292
VAL A 314
 None
 0.51A 1uayA-3u0bA:
22.3		 1uayA-3u0bA:
21.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UAY_B_ADNB1002_1
(TYPE II
3-HYDROXYACYL-COA
DEHYDROGENASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		7 / 10 GLY A 216
ALA A 218
ASP A 240
ASP A 263
VAL A 264
ALA A 292
VAL A 314
 None
 0.47A 1uayB-3u0bA:
22.7		 1uayB-3u0bA:
21.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BM9_E_SAME301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 GLY A 216
ASP A 240
ASP A 263
ASN A 291
ALA A 292
 None
 0.95A 2bm9E-3u0bA:
6.5		 2bm9E-3u0bA:
19.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2J9C_A_ACTA1121_0
(HYPOTHETICAL
NITROGEN REGULATORY
PII-LIKE PROTEIN
MJ0059)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 5 SER A 155
VAL A 185
VAL A 116
SER A 182
 None
 1.33A 2j9cA-3u0bA:
undetectable
2j9cB-3u0bA:
undetectable
2j9cC-3u0bA:
undetectable		 2j9cA-3u0bA:
12.78
2j9cB-3u0bA:
12.78
2j9cC-3u0bA:
12.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2JJP_A_KLNA413_1
(CYTOCHROME P450
113A1)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 ALA A 369
LEU A 370
ALA A 371
THR A 436
ILE A 339
 None
 1.18A 2jjpA-3u0bA:
undetectable		 2jjpA-3u0bA:
23.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OTH_A_NIMA300_1
(PHOSPHOLIPASE A2
VRV-PL-VIIIA)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 5 LEU A 366
ALA A 383
ILE A 364
SER A 342
 None
 1.01A 2othA-3u0bA:
undetectable		 2othA-3u0bA:
14.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V2G_A_BEZA1222_0
(PEROXIREDOXIN 6)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 7 PRO A 430
SER A 432
GLU A 171
PRO A 200
 None
 1.05A 2v2gA-3u0bA:
undetectable
2v2gB-3u0bA:
undetectable		 2v2gA-3u0bA:
21.56
2v2gB-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V2G_B_BEZB1220_0
(PEROXIREDOXIN 6)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 7 PRO A 200
PRO A 430
SER A 432
GLU A 171
 None
 1.04A 2v2gA-3u0bA:
undetectable
2v2gB-3u0bA:
undetectable		 2v2gA-3u0bA:
21.56
2v2gB-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V2G_C_BEZC1222_0
(PEROXIREDOXIN 6)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 7 PRO A 430
SER A 432
GLU A 171
PRO A 200
 None
 1.01A 2v2gC-3u0bA:
undetectable
2v2gD-3u0bA:
undetectable		 2v2gC-3u0bA:
21.56
2v2gD-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V32_A_BEZA1222_0
(PEROXIREDOXIN 6)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 PRO A 430
SER A 432
GLU A 171
PRO A 200
 None
 0.98A 2v32A-3u0bA:
undetectable
2v32B-3u0bA:
undetectable		 2v32A-3u0bA:
21.56
2v32B-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V32_B_BEZB1220_0
(PEROXIREDOXIN 6)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 PRO A 200
PRO A 430
SER A 432
GLU A 171
 None
 1.00A 2v32A-3u0bA:
undetectable
2v32B-3u0bA:
undetectable		 2v32A-3u0bA:
21.56
2v32B-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V32_C_BEZC1222_0
(PEROXIREDOXIN 6)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 PRO A 430
SER A 432
GLU A 171
PRO A 200
 None
 1.01A 2v32C-3u0bA:
undetectable
2v32D-3u0bA:
undetectable		 2v32C-3u0bA:
21.56
2v32D-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V41_E_BEZE1222_0
(PEROXIREDOXIN 6.)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 7 PRO A 430
SER A 432
GLU A 171
PRO A 200
 None
 1.01A 2v41E-3u0bA:
undetectable
2v41F-3u0bA:
undetectable		 2v41E-3u0bA:
21.56
2v41F-3u0bA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X45_B_HSMB1162_1
(ALLERGEN ARG R 1)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 GLU A  93
HIS A 129
GLU A  91
 None
 0.74A 2x45B-3u0bA:
undetectable		 2x45B-3u0bA:
17.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X45_C_HSMC1162_1
(ALLERGEN ARG R 1)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 GLU A  93
HIS A 129
GLU A  91
 None
 0.77A 2x45C-3u0bA:
undetectable		 2x45C-3u0bA:
17.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZMA_A_ACAA502_1
(6-AMINOHEXANOATE-DIM
ER HYDROLASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 11 ALA A 367
PHE A 427
ASN A 382
GLY A 365
ILE A 364
 None
 1.37A 2zmaA-3u0bA:
undetectable		 2zmaA-3u0bA:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3D1Z_B_017B201_1
(HIV-1 PROTEASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 GLY A 328
VAL A 285
ILE A 273
VAL A 338
ILE A 332
 None
 0.97A 3d1zA-3u0bA:
undetectable		 3d1zA-3u0bA:
13.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SJ1_X_DXCX75_0
(CYTOCHROME C7)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 6 ILE A 424
LEU A 341
MET A 344
GLY A 387
 None
 0.99A 3sj1X-3u0bA:
undetectable		 3sj1X-3u0bA:
10.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UBO_B_ADNB353_2
(ADENOSINE KINASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 5 SER A 343
ILE A 221
TYR A 356
GLY A 387
 None
 1.01A 3uboB-3u0bA:
6.1		 3uboB-3u0bA:
24.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UFN_A_ROCA401_1
(HIV-1 PROTEASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 11 GLY A 151
ALA A 152
VAL A  82
GLY A  81
GLY A  80
 None
 0.85A 3ufnA-3u0bA:
undetectable		 3ufnA-3u0bA:
13.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L1A_A_AB1A101_1
(MDR769 HIV-1
PROTEASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 11 GLY A 293
ALA A 292
ASP A 240
ILE A 424
VAL A 264
 None
 1.10A 4l1aA-3u0bA:
undetectable		 4l1aA-3u0bA:
14.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RTB_A_SAMA501_0
(HYDG PROTEIN)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 TYR A  64
VAL A 157
LEU A  44
LEU A  66
ALA A  59
 None
None
None
NA  A 451 ( 4.9A)
None
 1.22A 4rtbA-3u0bA:
2.1		 4rtbA-3u0bA:
20.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WCX_C_SAMC503_0
(BIOTIN AND THIAMIN
SYNTHESIS ASSOCIATED)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 TYR A  64
LEU A  44
LEU A  66
ARG A  57
ALA A  59
 None
None
NA  A 451 ( 4.9A)
None
None
 1.11A 4wcxC-3u0bA:
undetectable		 4wcxC-3u0bA:
21.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQG_A_AG2A505_1
(HOMOSPERMIDINE
SYNTHASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 ARG A 175
ASP A  63
ASP A 204
ASP A 202
 None
 1.12A 4xqgA-3u0bA:
6.3		 4xqgA-3u0bA:
24.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQG_B_AG2B505_1
(HOMOSPERMIDINE
SYNTHASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 ARG A 175
ASP A  63
ASP A 204
ASP A 202
 None
 1.13A 4xqgB-3u0bA:
6.3		 4xqgB-3u0bA:
24.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_4_BEZ4801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 1
ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 5 LEU A 288
PHE A 229
ILE A 339
ILE A 424
 None
 0.84A 5dzk4-3u0bA:
undetectable
5dzkg-3u0bA:
undetectable
5dzkm-3u0bA:
undetectable
5dzkn-3u0bA:
undetectable		 5dzk4-3u0bA:
4.08
5dzkg-3u0bA:
20.84
5dzkm-3u0bA:
18.72
5dzkn-3u0bA:
18.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HS1_A_VORA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 8 ILE A 177
GLY A 187
LEU A 411
LEU A  30
 None
 0.79A 5hs1A-3u0bA:
undetectable		 5hs1A-3u0bA:
23.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HW4_B_SAMB801_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE I)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 11 ILE A 332
GLY A 336
PHE A 229
LEU A 326
VAL A 213
 None
 1.32A 5hw4B-3u0bA:
2.0		 5hw4B-3u0bA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5I3B_B_HQEB303_1
(TYROSINASE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		4 / 5 HIS A 276
HIS A 281
VAL A 237
ALA A 259
 None
 1.32A 5i3bB-3u0bA:
undetectable		 5i3bB-3u0bA:
23.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JWA_A_ACTA609_0
(NADH DEHYDROGENASE,
PUTATIVE)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		3 / 3 VAL A  67
SER A  68
TRP A  75
 None
 0.92A 5jwaA-3u0bA:
4.5		 5jwaA-3u0bA:
22.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TUD_A_ERMA2001_1
(5-HYDROXYTRYPTAMINE
RECEPTOR 2B,SOLUBLE
CYTOCHROME B562
CHIMERA)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 SER A  49
VAL A  67
PHE A 101
PHE A  84
LEU A 105
 None
 1.13A 5tudA-3u0bA:
undetectable		 5tudA-3u0bA:
22.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TUD_D_ERMD1201_1
(5-HYDROXYTRYPTAMINE
RECEPTOR 2B,SOLUBLE
CYTOCHROME B562
CHIMERA)		 3u0b OXIDOREDUCTASE,
SHORT CHAIN
DEHYDROGENASE/REDUCT
ASE FAMILY PROTEIN
(Mycolicibacteriu
m
smegmatis) 		5 / 12 SER A  49
VAL A  67
PHE A 101
PHE A  84
LEU A 105
 None
 1.15A 5tudD-3u0bA:
undetectable		 5tudD-3u0bA:
22.01