SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ubu'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A  42
TRP A  25
 None
 1.23A 1c4dC-3ubuA:
undetectable
1c4dD-3ubuA:
undetectable		 1c4dC-3ubuA:
9.23
1c4dD-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B  42
TRP B  25
 None
 1.31A 1c4dC-3ubuB:
undetectable
1c4dD-3ubuB:
undetectable		 1c4dC-3ubuB:
9.17
1c4dD-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D4F_A_ADNA601_2
(S-ADENOSYLHOMOCYSTEI
NE HYDROLASE)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		4 / 5 GLU A  82
THR A  84
HIS B  40
HIS B  45
 None
None
None
GOL  B 128 (-4.0A)
 1.39A 1d4fA-3ubuA:
undetectable		 1d4fA-3ubuA:
15.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D4F_D_ADND604_2
(S-ADENOSYLHOMOCYSTEI
NE HYDROLASE)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		4 / 5 GLU A  82
THR A  84
HIS B  40
HIS B  45
 None
None
None
GOL  B 128 (-4.0A)
 1.38A 1d4fD-3ubuA:
undetectable		 1d4fD-3ubuA:
15.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCT_B_ASDB1223_1
(GLUTATHIONE
S-TRANSFERASE A2)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		4 / 8 ILE B  66
GLY B 101
LEU B  99
LEU B  70
 None
 0.84A 2vctB-3ubuB:
undetectable		 2vctB-3ubuB:
21.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_A_DVAA8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 VAL A 126
TRP A  25
TRP A  67
 None
 1.21A 2xdcA-3ubuA:
undetectable
2xdcB-3ubuA:
undetectable		 2xdcA-3ubuA:
9.23
2xdcB-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_A_DVAA8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  25
TRP B  67
 None
 1.11A 2xdcA-3ubuB:
undetectable
2xdcB-3ubuB:
undetectable		 2xdcA-3ubuB:
9.17
2xdcB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_A_DVAA8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  67
TRP B  25
 None
 1.42A 2xdcA-3ubuB:
undetectable
2xdcB-3ubuB:
undetectable		 2xdcA-3ubuB:
9.17
2xdcB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_B_DVAB8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.23A 2xdcA-3ubuA:
undetectable
2xdcB-3ubuA:
undetectable		 2xdcA-3ubuA:
9.23
2xdcB-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_B_DVAB8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  25
VAL B 121
TRP B  67
 None
 1.42A 2xdcA-3ubuB:
undetectable
2xdcB-3ubuB:
undetectable		 2xdcA-3ubuB:
9.17
2xdcB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_B_DVAB8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 1.14A 2xdcA-3ubuB:
undetectable
2xdcB-3ubuB:
undetectable		 2xdcA-3ubuB:
9.17
2xdcB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_C_DVAC8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 VAL A 126
TRP A  25
TRP A  67
 None
 1.23A 2xdcC-3ubuA:
undetectable
2xdcD-3ubuA:
undetectable		 2xdcC-3ubuA:
9.23
2xdcD-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_C_DVAC8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  25
TRP B  67
 None
 1.18A 2xdcC-3ubuB:
undetectable
2xdcD-3ubuB:
undetectable		 2xdcC-3ubuB:
9.17
2xdcD-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_D_DVAD8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.03A 2xdcC-3ubuA:
undetectable
2xdcD-3ubuA:
undetectable		 2xdcC-3ubuA:
9.23
2xdcD-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_D_DVAD8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B  42
TRP B  25
 None
 1.33A 2xdcC-3ubuB:
undetectable
2xdcD-3ubuB:
undetectable		 2xdcC-3ubuB:
9.17
2xdcD-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_D_DVAD8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 0.93A 2xdcC-3ubuB:
undetectable
2xdcD-3ubuB:
undetectable		 2xdcC-3ubuB:
9.17
2xdcD-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_F_DVAF8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.06A 2xdcE-3ubuA:
undetectable
2xdcF-3ubuA:
undetectable		 2xdcE-3ubuA:
9.23
2xdcF-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_F_DVAF8_0
(GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 0.94A 2xdcE-3ubuB:
undetectable
2xdcF-3ubuB:
undetectable		 2xdcE-3ubuB:
9.17
2xdcF-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y00_B_Y00B601_2
(BETA-1 ADRENERGIC
RECEPTOR)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
ASN B 107
TRP B 109
 None
 1.03A 2y00B-3ubuB:
undetectable		 2y00B-3ubuB:
19.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 VAL A 126
TRP A  25
TRP A  67
 None
 1.20A 2y5mA-3ubuA:
undetectable
2y5mB-3ubuA:
undetectable		 2y5mA-3ubuA:
9.23
2y5mB-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  25
TRP B  67
 None
 1.11A 2y5mA-3ubuB:
undetectable
2y5mB-3ubuB:
undetectable		 2y5mA-3ubuB:
9.17
2y5mB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  67
TRP B  25
 None
 1.42A 2y5mA-3ubuB:
undetectable
2y5mB-3ubuB:
undetectable		 2y5mA-3ubuB:
9.17
2y5mB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_F_DVAF8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.03A 2y5mE-3ubuA:
undetectable
2y5mF-3ubuA:
undetectable		 2y5mE-3ubuA:
9.23
2y5mF-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_F_DVAF8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 0.93A 2y5mE-3ubuB:
undetectable
2y5mF-3ubuB:
undetectable		 2y5mE-3ubuB:
9.17
2y5mF-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 VAL A 126
TRP A  25
TRP A  67
 None
 1.20A 2y6nA-3ubuA:
undetectable
2y6nB-3ubuA:
undetectable		 2y6nA-3ubuA:
9.23
2y6nB-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  25
TRP B  67
 None
 1.11A 2y6nA-3ubuB:
undetectable
2y6nB-3ubuB:
undetectable		 2y6nA-3ubuB:
9.17
2y6nB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  67
TRP B  25
 None
 1.43A 2y6nA-3ubuB:
undetectable
2y6nB-3ubuB:
undetectable		 2y6nA-3ubuB:
9.17
2y6nB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_B_DVAB8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.21A 2y6nA-3ubuA:
undetectable
2y6nB-3ubuA:
undetectable		 2y6nA-3ubuA:
9.23
2y6nB-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_B_DVAB8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  25
VAL B 121
TRP B  67
 None
 1.41A 2y6nA-3ubuB:
undetectable
2y6nB-3ubuB:
undetectable		 2y6nA-3ubuB:
9.17
2y6nB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_B_DVAB8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 1.12A 2y6nA-3ubuB:
undetectable
2y6nB-3ubuB:
undetectable		 2y6nA-3ubuB:
9.17
2y6nB-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_D_DVAD8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.01A 2y6nC-3ubuA:
undetectable
2y6nD-3ubuA:
undetectable		 2y6nC-3ubuA:
9.23
2y6nD-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_D_DVAD8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 0.91A 2y6nC-3ubuB:
undetectable
2y6nD-3ubuB:
undetectable		 2y6nC-3ubuB:
9.17
2y6nD-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_F_DVAF8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A 126
TRP A  25
 None
 1.02A 2y6nE-3ubuA:
undetectable
2y6nF-3ubuA:
undetectable		 2y6nE-3ubuA:
9.23
2y6nF-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_F_DVAF8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B 121
TRP B  25
 None
 0.91A 2y6nE-3ubuB:
undetectable
2y6nF-3ubuB:
undetectable		 2y6nE-3ubuB:
9.17
2y6nF-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 VAL A 126
TRP A  25
TRP A  67
 None
 1.17A 3zq8A-3ubuA:
undetectable
3zq8B-3ubuA:
undetectable		 3zq8A-3ubuA:
9.23
3zq8B-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_A_DVAA8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 VAL B 121
TRP B  25
TRP B  67
 None
 1.10A 3zq8A-3ubuB:
undetectable
3zq8B-3ubuB:
undetectable		 3zq8A-3ubuB:
9.17
3zq8B-3ubuB:
9.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_D_DVAD8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
ALPHA-1
(Deinagkistrodon
acutus) 		3 / 3 TRP A  67
VAL A  42
TRP A  25
 None
 0.89A 3zq8C-3ubuA:
undetectable
3zq8D-3ubuA:
undetectable		 3zq8C-3ubuA:
9.23
3zq8D-3ubuA:
9.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_D_DVAD8_0
(VAL-GRAMICIDIN A)		 3ubu AGGLUCETIN SUBUNIT
BETA-2
(Deinagkistrodon
acutus) 		3 / 3 TRP B  67
VAL B  42
TRP B  25
 None
 1.05A 3zq8C-3ubuB:
undetectable
3zq8D-3ubuB:
undetectable		 3zq8C-3ubuB:
9.17
3zq8D-3ubuB:
9.17