SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3vbj'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HVY_B_D16B415_1
(THYMIDYLATE SYNTHASE)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
5 / 12 ILE A  24
LEU A  50
PHE A  15
TYR A  69
ALA A  67
None
1.30A 1hvyB-3vbjA:
undetectable
1hvyB-3vbjA:
19.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VM1_A_TAZA504_1
(BETA-LACTAMASE SHV-1)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
3 / 3 ASP A  79
TYR A  78
GLU A 140
None
0.81A 1vm1A-3vbjA:
undetectable
1vm1A-3vbjA:
18.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXE_A_1FLA2001_1
(SERUM ALBUMIN)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
5 / 11 LEU A  23
ASN A  21
VAL A  18
GLY A  19
LEU A  10
None
1.26A 2bxeA-3vbjA:
undetectable
2bxeA-3vbjA:
15.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HA4_A_ACTA544_0
(ACETYLCHOLINESTERASE)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 8 GLY A  71
GLY A  70
ALA A  92
ALA A  91
None
0.62A 2ha4A-3vbjA:
undetectable
2ha4A-3vbjA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HA4_B_ACTB601_0
(ACETYLCHOLINESTERASE)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 7 GLY A  71
GLY A  70
ALA A  92
ALA A  91
None
0.65A 2ha4B-3vbjA:
undetectable
2ha4B-3vbjA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QBM_A_CAMA517_0
(CYTOCHROME P450-CAM)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 8 VAL A  54
THR A  55
VAL A  42
ILE A  44
None
0.95A 2qbmA-3vbjA:
undetectable
2qbmA-3vbjA:
19.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P4W_C_DSFC320_1
(GLR4197 PROTEIN)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 8 TYR A  90
ILE A 131
ILE A 132
ILE A  83
None
0.88A 3p4wC-3vbjA:
undetectable
3p4wC-3vbjA:
22.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4AFT_D_QMRD301_1
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 8 VAL A 118
TYR A  78
VAL A  89
ILE A 138
None
1.12A 4aftD-3vbjA:
undetectable
4aftE-3vbjA:
undetectable
4aftD-3vbjA:
19.75
4aftE-3vbjA:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z4H_A_IPHA902_0
(PROTEIN ARGONAUTE-2)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 5 LYS A  26
LEU A  10
GLU A   9
TYR A   5
None
1.47A 4z4hA-3vbjA:
undetectable
4z4hA-3vbjA:
13.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E4D_B_BEZB201_0
(HYDROXYNITRILE LYASE)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
5 / 11 VAL A 165
VAL A 150
ILE A 125
ILE A 126
LEU A 154
None
1.02A 5e4dB-3vbjA:
undetectable
5e4dB-3vbjA:
28.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ESF_A_TPFA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 8 TYR A  69
ILE A  93
TYR A  90
GLY A 103
None
0.86A 5esfA-3vbjA:
undetectable
5esfA-3vbjA:
15.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MUR_B_PFLB407_1
(PROTON-GATED ION
CHANNEL)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 7 TYR A  90
ILE A 131
ILE A 132
ILE A  83
None
0.87A 5murB-3vbjA:
undetectable
5murB-3vbjA:
18.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MZR_A_PFLA412_1
(PROTON-GATED ION
CHANNEL)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
5 / 10 TYR A  69
TYR A  90
ILE A 131
ILE A 132
ILE A  83
None
1.20A 5mzrA-3vbjA:
undetectable
5mzrA-3vbjA:
18.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDH_A_DAHA60_1
(PUTATIVE CYTOCHROME
C)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 6 MET A  77
ASN A 135
VAL A 137
LEU A 120
None
1.35A 5xdhA-3vbjA:
undetectable
5xdhC-3vbjA:
undetectable
5xdhA-3vbjA:
16.92
5xdhC-3vbjA:
16.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDH_B_DAHB60_1
(PUTATIVE CYTOCHROME
C)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 5 MET A  77
ASN A 135
VAL A 137
LEU A 120
None
1.24A 5xdhB-3vbjA:
undetectable
5xdhB-3vbjA:
16.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDH_D_DAHD60_1
(PUTATIVE CYTOCHROME
C)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 5 MET A  77
ASN A 135
VAL A 137
LEU A 120
None
1.15A 5xdhD-3vbjA:
undetectable
5xdhD-3vbjA:
16.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CJK_C_ACTC301_0
(IMMUNOGLOBULIN FAB
LIGHT CHAIN)
3vbj GALACTOSIDE
O-ACETYLTRANSFERASE

(Bacillus
cereus)
4 / 4 VAL A 137
GLY A 139
ASP A 156
ASP A 155
None
1.31A 6cjkC-3vbjA:
undetectable
6cjkC-3vbjA:
20.75