SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3vdd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UOB_A_PNNA1311_1
(DEACETOXYCEPHALOSPOR
IN C SYNTHETASE)		 3vdd PROTEIN VP1
(Rhinovirus
A) 		3 / 3 ARG A 219
ARG A 156
ILE A 139
 None
 0.77A 1uobA-3vddA:
undetectable		 1uobA-3vddA:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UOB_A_PNNA1311_1
(DEACETOXYCEPHALOSPOR
IN C SYNTHETASE)		 3vdd PROTEIN VP1
(Rhinovirus
A) 		3 / 3 ARG A 219
ARG A 156
ILE A 231
 None
 0.82A 1uobA-3vddA:
undetectable		 1uobA-3vddA:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YZQ_A_SAMA6075_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN PH1780)		 3vdd PROTEIN VP1
(Rhinovirus
A) 		5 / 12 MET A 232
THR A  95
ILE A 123
ILE A 235
PRO A 178
 None
None
BT8  A 301 (-4.2A)
BT8  A 301 ( 4.9A)
None
 1.13A 2yzqA-3vddA:
undetectable		 2yzqA-3vddA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P7N_A_GCSA702_1
(POLY-BETA-1,6-N-ACET
YL-D-GLUCOSAMINE
N-DEACETYLASE)		 3vdd PROTEIN VP1
(Rhinovirus
A) 		3 / 3 ASP A 158
TYR A 159
TRP A 161
 None
 1.18A 4p7nA-3vddA:
undetectable		 4p7nA-3vddA:
22.19