SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3vjj'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CQP_A_803A311_1
(ANTIGEN CD11A (P180))
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
5 / 10 LEU A 248
ILE A 241
TYR A 280
LEU A 228
LEU A 225
None
1.01A 1cqpA-3vjjA:
undetectable
1cqpB-3vjjA:
undetectable
1cqpA-3vjjA:
21.85
1cqpB-3vjjA:
21.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V55_J_CHDJ3060_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE I
CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 7 ILE A  73
LEU A  76
ARG A 341
THR A 178
None
0.92A 1v55A-3vjjA:
undetectable
1v55J-3vjjA:
undetectable
1v55A-3vjjA:
20.11
1v55J-3vjjA:
10.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2CEO_A_T44A1395_1
(THYROXINE-BINDING
GLOBULIN)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
5 / 11 LEU A  76
LEU A  80
SER A 189
LEU A 190
LEU A  77
None
1.12A 2ceoA-3vjjA:
undetectable
2ceoA-3vjjA:
24.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_A_P1ZA1353_1
(PROSTAGLANDIN
REDUCTASE 2)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
5 / 9 PHE A 309
GLU A 306
GLY A 329
GLU A 301
ILE A 299
None
0.97A 2w98A-3vjjA:
undetectable
2w98A-3vjjA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG3_J_CHDJ60_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 1)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 7 ILE A  73
LEU A  76
ARG A 341
THR A 178
None
0.91A 3ag3A-3vjjA:
0.4
3ag3J-3vjjA:
undetectable
3ag3A-3vjjA:
20.11
3ag3J-3vjjA:
10.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A83_A_DXCA1160_0
(MAJOR POLLEN
ALLERGEN BET V 1-A)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
5 / 12 PHE A  94
PHE A  30
LEU A 247
ILE A  73
TYR A 244
None
1.37A 4a83A-3vjjA:
undetectable
4a83A-3vjjA:
18.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F8Y_B_VK3B202_1
(NADPH QUINONE
OXIDOREDUCTASE)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 6 ASN A 233
ARG A 286
TYR A  33
LEU A  68
None
1.39A 4f8yA-3vjjA:
undetectable
4f8yB-3vjjA:
undetectable
4f8yA-3vjjA:
16.58
4f8yB-3vjjA:
16.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F8Y_C_VK3C202_1
(NADPH QUINONE
OXIDOREDUCTASE)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 7 ARG A 286
TYR A  33
LEU A  68
ASN A 233
None
1.30A 4f8yC-3vjjA:
undetectable
4f8yD-3vjjA:
undetectable
4f8yC-3vjjA:
16.58
4f8yD-3vjjA:
16.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ODR_B_FK5B201_1
(PEPTIDYL-PROLYL
CIS-TRANS ISOMERASE
SLYD,
PEPTIDYL-PROLYL
CIS-TRANS ISOMERASE
FKBP1A CHIMERA)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
5 / 11 LEU A 274
LEU A 225
LEU A 228
ILE A  73
PHE A 282
None
1.05A 4odrA-3vjjA:
undetectable
4odrB-3vjjA:
undetectable
4odrA-3vjjA:
16.36
4odrB-3vjjA:
16.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WG0_C_CHDC102_0
(NUCLEAR RECEPTOR
COACTIVATOR 2)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 7 LEU A 274
LEU A 285
ARG A 286
LEU A 289
None
0.71A 4wg0B-3vjjA:
undetectable
4wg0C-3vjjA:
undetectable
4wg0B-3vjjA:
8.53
4wg0C-3vjjA:
8.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WG0_L_CHDL103_0
(NUCLEAR RECEPTOR
COACTIVATOR 2)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 7 LEU A 285
ARG A 286
LEU A 289
LEU A 274
None
0.73A 4wg0L-3vjjA:
undetectable
4wg0M-3vjjA:
undetectable
4wg0L-3vjjA:
8.53
4wg0M-3vjjA:
8.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JH7_B_6K9B503_1
(TUBULIN ALPHA-1B
CHAIN
TUBULIN BETA-2B
CHAIN)
3vjj P9-1
(Rice
black
streaked
dwarf
virus)
4 / 7 LEU A 191
VAL A 176
GLU A 187
VAL A 172
None
1.20A 5jh7C-3vjjA:
undetectable
5jh7C-3vjjA:
21.56