SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3vtx'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1U18_B_HSMB402_1
(NITROPHORIN 1)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		4 / 5 ASP A  52
GLU A  79
THR A  87
LEU A  84
 None
 1.20A 1u18B-3vtxA:
undetectable		 1u18B-3vtxA:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P5N_A_RBFA190_1
(RIBOFLAVIN UPTAKE
PROTEIN)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		5 / 12 LEU A  84
THR A  87
ASP A  52
GLY A  51
ALA A  66
 None
 1.12A 3p5nA-3vtxA:
undetectable		 3p5nA-3vtxA:
21.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P5N_B_RBFB190_1
(RIBOFLAVIN UPTAKE
PROTEIN)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		5 / 12 LEU A  84
THR A  87
ASP A  52
GLY A  51
ALA A  66
 None
 1.12A 3p5nB-3vtxA:
undetectable		 3p5nB-3vtxA:
21.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UJ7_A_SAMA301_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		5 / 12 GLY A 119
ILE A 117
ILE A  98
ASP A 133
ALA A 134
 None
 1.21A 3uj7A-3vtxA:
undetectable		 3uj7A-3vtxA:
22.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UJ7_B_SAMB302_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		5 / 12 GLY A 119
ILE A 117
ILE A  98
ASP A 133
ALA A 134
 None
 1.22A 3uj7B-3vtxA:
undetectable		 3uj7B-3vtxA:
22.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IJI_H_BEZH501_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN YIBF)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		4 / 7 ASN A 122
VAL A 105
TYR A 115
ARG A 137
 None
 1.05A 4ijiH-3vtxA:
undetectable		 4ijiH-3vtxA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6F6S_A_CXQA507_1
(ENVELOPE
GLYCOPROTEIN,ENVELOP
E GLYCOPROTEIN,GP1
ENVELOPE
GLYCOPROTEIN)		 3vtx MAMA
(Candidatus
Magnetobacterium
bavaricum) 		4 / 5 ARG A 181
ALA A 182
TYR A 169
GLN A 184
 None
 1.27A 6f6sA-3vtxA:
undetectable
6f6sB-3vtxA:
undetectable		 6f6sA-3vtxA:
19.30
6f6sB-3vtxA:
20.11