SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3w4u'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1LH6_A_NIOA155_1
(LEGHEMOGLOBIN A
(NICOTINATE MET))		 3w4u HEMOGLOBIN SUBUNIT
ZETA
(Homo
sapiens) 		4 / 7 PHE A  43
PHE A  46
VAL A  62
HIS A  87
 HEM  A 201 (-3.9A)
HEM  A 201 (-4.4A)
HEM  A 201 (-4.1A)
HEM  A 201 ( 3.2A)
 0.96A 1lh6A-3w4uA:
13.8		 1lh6A-3w4uA:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXE_B_1FLB2003_1
(SERUM ALBUMIN)		 3w4u HEMOGLOBIN SUBUNIT
ZETA
(Homo
sapiens) 		5 / 10 PHE A 128
LEU A 136
HIS A  87
ILE A  76
ALA A  65
 None
None
HEM  A 201 ( 3.2A)
None
HEM  A 201 ( 3.7A)
 1.06A 2bxeB-3w4uA:
2.1		 2bxeB-3w4uA:
13.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2RLF_A_RIMA199_1
(MATRIX PROTEIN 2)		 3w4u HEMOGLOBIN SUBUNIT
ZETA
(Homo
sapiens) 		4 / 6 LEU A 109
LEU A 106
ILE A  24
ARG A  31
 None
 1.05A 2rlfA-3w4uA:
undetectable
2rlfB-3w4uA:
undetectable		 2rlfA-3w4uA:
20.00
2rlfB-3w4uA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECK_A_ILEA601_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)		 3w4u HEMOGLOBIN SUBUNIT
ZETA
(Homo
sapiens) 		4 / 6 THR A  39
TYR A  42
VAL A  96
HIS A  36
 HEM  A 201 ( 4.6A)
HEM  A 201 (-4.3A)
None
None
 1.03A 5eckA-3w4uA:
2.3		 5eckA-3w4uA:
12.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ECK_D_ILED601_0
(JASMONIC ACID-AMIDO
SYNTHETASE JAR1)		 3w4u HEMOGLOBIN SUBUNIT
ZETA
(Homo
sapiens) 		4 / 6 THR A  39
TYR A  42
VAL A  96
HIS A  36
 HEM  A 201 ( 4.6A)
HEM  A 201 (-4.3A)
None
None
 0.99A 5eckD-3w4uA:
undetectable		 5eckD-3w4uA:
12.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NWW_A_ACAA18_2
(SCRFP-TAG,GP41)		 3w4u HEMOGLOBIN SUBUNIT
ZETA
(Homo
sapiens) 		3 / 3 LYS A  71
TRP A  14
SER A  72
 None
 1.31A 5nwwA-3w4uA:
undetectable		 5nwwA-3w4uA:
12.23