SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3waf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD4_A_CHDA801_0
(FERROCHELATASE)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 12 LEU A 143
PHE A 146
LEU A 124
LEU A 203
VAL A 221
 IPA  A 401 (-4.8A)
None
None
None
None
 1.39A 2qd4A-3wafA:
undetectable		 2qd4A-3wafA:
22.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD4_B_CHDB928_0
(FERROCHELATASE)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 12 LEU A 143
PHE A 146
LEU A 124
LEU A 203
VAL A 221
 IPA  A 401 (-4.8A)
None
None
None
None
 1.34A 2qd4B-3wafA:
undetectable		 2qd4B-3wafA:
22.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QXY_A_SAMA6734_0
(N-LYSINE
METHYLTRANSFERASE
SETD6)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 12 ALA A 250
GLY A 249
ALA A 274
TYR A 268
PHE A 265
 None
 1.19A 3qxyA-3wafA:
undetectable		 3qxyA-3wafA:
23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QXY_B_SAMB6735_0
(N-LYSINE
METHYLTRANSFERASE
SETD6
TRANSCRIPTION FACTOR
P65)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 11 ALA A 250
GLY A 249
ALA A 274
TYR A 268
PHE A 265
 None
 1.17A 3qxyB-3wafA:
undetectable
3qxyQ-3wafA:
undetectable		 3qxyB-3wafA:
23.74
3qxyQ-3wafA:
4.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RC0_A_SAMA484_0
(N-LYSINE
METHYLTRANSFERASE
SETD6)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 11 ALA A 250
GLY A 249
ALA A 274
TYR A 268
PHE A 265
 None
 1.18A 3rc0A-3wafA:
undetectable		 3rc0A-3wafA:
23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RC0_B_SAMB480_0
(N-LYSINE
METHYLTRANSFERASE
SETD6)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 12 ALA A 250
GLY A 249
ALA A 274
TYR A 268
PHE A 265
 None
 1.19A 3rc0B-3wafA:
undetectable		 3rc0B-3wafA:
23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LJ0_A_ACTA505_0
(NAB2)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		3 / 3 LEU A 253
LYS A 254
THR A 255
 None
 0.60A 4lj0A-3wafA:
undetectable		 4lj0A-3wafA:
9.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XE3_A_CL6A502_1
(CYTOCHROME P-450)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		4 / 5 LEU A 269
THR A  46
VAL A  50
ILE A  48
 None
 0.85A 4xe3A-3wafA:
undetectable		 4xe3A-3wafA:
24.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XE3_B_CL6B502_1
(CYTOCHROME P-450)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		4 / 5 LEU A 269
THR A  46
VAL A  50
ILE A  48
 None
 0.81A 4xe3B-3wafA:
undetectable		 4xe3B-3wafA:
24.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZME_A_ADNA1002_1
(MYOSIN HEAVY CHAIN
KINASE A)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 11 ALA A  78
VAL A 117
LEU A 100
LEU A 269
LEU A 266
 None
 1.15A 4zmeA-3wafA:
undetectable		 4zmeA-3wafA:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZME_B_ADNB902_1
(MYOSIN HEAVY CHAIN
KINASE A)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 10 ALA A  78
VAL A 117
LEU A 100
LEU A 269
LEU A 266
 None
 1.15A 4zmeB-3wafA:
undetectable		 4zmeB-3wafA:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EML_A_SAMA701_0
(PROTEIN ARGININE
N-METHYLTRANSFERASE
5)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 12 PRO A 104
GLY A 249
LEU A  75
ARG A 112
LEU A 100
 None
 1.40A 5emlA-3wafA:
2.1		 5emlA-3wafA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LJE_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		5 / 12 LEU A 315
LEU A 310
ALA A 174
LEU A 185
LEU A 324
 None
 1.03A 5ljeA-3wafA:
undetectable		 5ljeA-3wafA:
16.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UMW_B_RBFB201_1
(GLYOXALASE/BLEOMYCIN
RESISANCE
PROTEIN/DIOXYGENASE)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		4 / 7 VAL A  39
TYR A  54
GLU A  36
ARG A  49
 None
 0.91A 5umwB-3wafA:
undetectable
5umwE-3wafA:
undetectable		 5umwB-3wafA:
14.39
5umwE-3wafA:
14.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UMW_F_RBFF201_1
(GLYOXALASE/BLEOMYCIN
RESISANCE
PROTEIN/DIOXYGENASE)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		4 / 7 ARG A  49
VAL A  39
TYR A  54
GLU A  36
 None
 0.95A 5umwA-3wafA:
undetectable
5umwF-3wafA:
undetectable		 5umwA-3wafA:
14.39
5umwF-3wafA:
14.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WM2_A_ACTA605_0
(SALICYLATE-AMP
LIGASE)		 3waf IRON ABC
TRANSPORTER,
PERIPLASMIC
IRON-BINDING PROTEIN
(Thermus
thermophilus) 		3 / 3 THR A 118
THR A 248
ARG A  30
 None
 1.08A 5wm2A-3wafA:
undetectable		 5wm2A-3wafA:
20.73