SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3wkm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZF_A_FOLA605_0
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
0.94A 1qzfA-3wkmA:
undetectable
1qzfA-3wkmA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZF_B_FOLB609_0
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
0.94A 1qzfB-3wkmA:
undetectable
1qzfB-3wkmA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZF_C_FOLC613_0
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
0.94A 1qzfC-3wkmA:
undetectable
1qzfC-3wkmA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZF_D_FOLD617_0
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
0.94A 1qzfD-3wkmA:
undetectable
1qzfD-3wkmA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZF_E_FOLE621_0
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
0.95A 1qzfE-3wkmA:
undetectable
1qzfE-3wkmA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OIP_A_MTXA605_1
(CHAIN A, CRYSTAL
STRUCTURE OF DHFR)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
1.01A 2oipA-3wkmA:
undetectable
2oipA-3wkmA:
14.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HJ3_D_MTXD615_1
(CHAIN A, CRYSTAL
STRUCTURE OF DHFR)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 12 VAL A 154
LEU A 179
THR A 175
ILE A 190
LEU A 201
None
1.12A 3hj3D-3wkmA:
undetectable
3hj3D-3wkmA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M2X_A_TMQA202_2
(DIHYDROFOLATE
REDUCTASE)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
3 / 3 TRP A 242
GLN A 130
THR A 241
None
0.99A 4m2xA-3wkmA:
undetectable
4m2xA-3wkmA:
21.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CZM_B_HISB402_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE CATALYTIC
SUBUNIT)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 9 VAL A 234
VAL A 246
LEU A 259
GLY A 286
LEU A 287
None
1.26A 6czmA-3wkmA:
undetectable
6czmB-3wkmA:
undetectable
6czmA-3wkmA:
23.40
6czmB-3wkmA:
23.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CZM_C_HISC402_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE CATALYTIC
SUBUNIT)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 9 VAL A 234
VAL A 246
LEU A 259
GLY A 286
LEU A 287
None
1.27A 6czmB-3wkmA:
undetectable
6czmC-3wkmA:
undetectable
6czmB-3wkmA:
23.40
6czmC-3wkmA:
23.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CZM_E_HISE402_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE CATALYTIC
SUBUNIT)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 9 VAL A 234
VAL A 246
LEU A 259
GLY A 286
LEU A 287
None
1.28A 6czmD-3wkmA:
undetectable
6czmE-3wkmA:
undetectable
6czmD-3wkmA:
23.40
6czmE-3wkmA:
23.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CZM_F_HISF402_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE CATALYTIC
SUBUNIT)
3wkm PUTATIVE ZINC
METALLOPROTEASE
AQ_1964

(Aquifex
aeolicus)
5 / 10 VAL A 234
VAL A 246
LEU A 259
GLY A 286
LEU A 287
None
1.24A 6czmE-3wkmA:
undetectable
6czmF-3wkmA:
undetectable
6czmE-3wkmA:
23.40
6czmF-3wkmA:
23.40