SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4b0e'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PXX_A_DIFA701_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4b0e F1 CAPSULE-ANCHORING
PROTEIN

(Yersinia
pestis)
5 / 10 VAL A  38
LEU A 113
LEU A  83
ALA A 119
LEU A 120
None
1.11A 1pxxA-4b0eA:
undetectable
1pxxA-4b0eA:
12.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8Z_B_FLPB1701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)
4b0e F1 CAPSULE-ANCHORING
PROTEIN

(Yersinia
pestis)
5 / 12 VAL A  38
LEU A 113
LEU A  83
ALA A 119
LEU A 120
None
1.02A 3n8zB-4b0eA:
undetectable
3n8zB-4b0eA:
13.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4B3Q_A_NVPA999_1
(REVERSE
TRANSCRIPTASE/RIBONU
CLEASE H)
4b0e F1 CAPSULE-ANCHORING
PROTEIN

(Yersinia
pestis)
4 / 7 LEU A  94
VAL A  38
TYR A  73
LEU A 111
None
1.11A 4b3qA-4b0eA:
undetectable
4b3qA-4b0eA:
14.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKQ_A_JMSA602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4b0e F1 CAPSULE-ANCHORING
PROTEIN

(Yersinia
pestis)
5 / 12 VAL A  38
LEU A 113
LEU A  83
ALA A 119
LEU A 120
None
1.12A 5ikqA-4b0eA:
undetectable
5ikqA-4b0eA:
14.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKQ_B_JMSB602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
4b0e F1 CAPSULE-ANCHORING
PROTEIN

(Yersinia
pestis)
5 / 12 VAL A  38
LEU A 113
LEU A  83
ALA A 119
LEU A 120
None
1.12A 5ikqB-4b0eA:
undetectable
5ikqB-4b0eA:
14.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6NMP_J_CHDJ101_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
4b0e F1 CAPSULE-ANCHORING
PROTEIN

(Yersinia
pestis)
4 / 7 ILE A  48
LEU A 111
THR A  71
LEU A  70
None
0.87A 6nmpA-4b0eA:
undetectable
6nmpJ-4b0eA:
undetectable
6nmpA-4b0eA:
13.28
6nmpJ-4b0eA:
19.67