SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4bgb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AXW_A_MTXA732_1
(THYMIDYLATE SYNTHASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 ILE A  43
LEU A 106
GLY A 121
VAL A 135
ALA A 345
 None
 0.99A 1axwA-4bgbA:
undetectable		 1axwA-4bgbA:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HRK_B_CHDB2503_0
(FERROCHELATASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 4 LEU A 194
PRO A 193
LEU A 273
ARG A 271
 None
 1.34A 1hrkB-4bgbA:
2.6		 1hrkB-4bgbA:
21.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JLB_A_NVPA999_1
(HIV-1 RT A-CHAIN)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 8 LEU A 333
TYR A 136
GLY A 145
TYR A 152
 None
 0.87A 1jlbA-4bgbA:
3.4		 1jlbA-4bgbA:
19.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLS_A_C2FA266_0
(THYMIDYLATE SYNTHASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 ILE A  43
LEU A 106
GLY A 121
VAL A 135
ALA A 345
 None
 1.09A 1tlsA-4bgbA:
undetectable		 1tlsA-4bgbA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLS_B_C2FB266_0
(THYMIDYLATE SYNTHASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 ILE A  43
LEU A 106
GLY A 121
VAL A 135
ALA A 345
 None
 1.05A 1tlsB-4bgbA:
undetectable		 1tlsB-4bgbA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TSN_A_C2FA266_0
(THYMIDYLATE SYNTHASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 ILE A  43
LEU A 106
GLY A 121
VAL A 135
ALA A 345
 None
 1.00A 1tsnA-4bgbA:
undetectable		 1tsnA-4bgbA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FL5_F_RBFF204_1
(IMMUNOGLOBULIN IGG1
LAMBDA LIGHT CHAIN
IMMUNOGLOBULIN IGG1
HEAVY CHAIN)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 8 TYR A 152
ARG A 336
GLU A 341
VAL A 148
 None
 1.06A 2fl5E-4bgbA:
undetectable
2fl5F-4bgbA:
undetectable		 2fl5E-4bgbA:
20.62
2fl5F-4bgbA:
16.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HRC_B_CHDB1604_0
(FERROCHELATASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 4 LEU A 194
PRO A 193
LEU A 273
ARG A 271
 None
 1.31A 2hrcB-4bgbA:
undetectable		 2hrcB-4bgbA:
21.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2KCE_B_D16B568_1
(THYMIDYLATE SYNTHASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 LEU A 338
LEU A 330
GLY A 329
VAL A 108
ALA A 107
 None
 1.24A 2kceB-4bgbA:
undetectable		 2kceB-4bgbA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PNJ_B_CHDB503_0
(FERROCHELATASE,
MITOCHONDRIAL)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 4 LEU A 194
PRO A 193
LEU A 273
ARG A 271
 None
 1.33A 2pnjB-4bgbA:
2.5		 2pnjB-4bgbA:
21.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QEU_A_ACTA141_0
(PUTATIVE
CARBOXYMUCONOLACTONE
DECARBOXYLASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		3 / 3 VAL A 113
ASP A 144
GLU A 115
 None
K  A1357 ( 2.4A)
None
 0.70A 2qeuA-4bgbA:
undetectable		 2qeuA-4bgbA:
18.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QEU_C_ACTC141_0
(PUTATIVE
CARBOXYMUCONOLACTONE
DECARBOXYLASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		3 / 3 VAL A 113
ASP A 144
GLU A 115
 None
K  A1357 ( 2.4A)
None
 0.70A 2qeuC-4bgbA:
undetectable		 2qeuC-4bgbA:
18.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ABK_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 3)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 6 LEU A 276
PHE A 237
LEU A 226
PHE A 222
 None
 0.93A 3abkP-4bgbA:
undetectable
3abkW-4bgbA:
undetectable		 3abkP-4bgbA:
19.53
3abkW-4bgbA:
11.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HS6_B_EPAB1_1
(PROSTAGLANDIN G/H
SYNTHASE 2)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 PHE A 182
GLY A 137
GLY A 329
ALA A 327
GLY A 145
 None
 1.01A 3hs6B-4bgbA:
undetectable		 3hs6B-4bgbA:
18.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ME6_A_CGEA501_1
(CYTOCHROME P450 2B4)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 10 VAL A  70
ILE A  91
ILE A 124
VAL A 109
VAL A  95
 GOL  A1354 ( 4.9A)
GOL  A1354 ( 4.5A)
None
None
None
 1.09A 3me6A-4bgbA:
undetectable		 3me6A-4bgbA:
20.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QEO_B_LLTB261_1
(DEOXYCYTIDINE KINASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 7 VAL A 135
LEU A 333
TYR A 152
GLN A  44
 None
None
None
GOL  A1355 (-4.0A)
 1.05A 3qeoB-4bgbA:
undetectable		 3qeoB-4bgbA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SXJ_A_SAMA258_0
(PUTATIVE
METHYLTRANSFERASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 GLY A 110
GLN A  44
LEU A 133
GLU A 326
TYR A 152
 None
GOL  A1355 (-4.0A)
None
CA  A1359 ( 2.3A)
None
 1.06A 3sxjA-4bgbA:
undetectable		 3sxjA-4bgbA:
22.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SXJ_B_SAMB258_0
(PUTATIVE
METHYLTRANSFERASE)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		5 / 12 GLY A 110
GLN A  44
LEU A 133
GLU A 326
TYR A 152
 None
GOL  A1355 (-4.0A)
None
CA  A1359 ( 2.3A)
None
 1.06A 3sxjB-4bgbA:
undetectable		 3sxjB-4bgbA:
22.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WG7_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 6 LEU A 276
PHE A 237
LEU A 226
PHE A 222
 None
 1.00A 3wg7P-4bgbA:
undetectable
3wg7W-4bgbA:
undetectable		 3wg7P-4bgbA:
19.53
3wg7W-4bgbA:
11.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WIP_G_ACTG306_0
(ACETYLCHOLINE-BINDIN
G PROTEIN)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		3 / 3 ARG A 241
ARG A 227
ASP A 230
 None
 0.95A 3wipG-4bgbA:
undetectable
3wipH-4bgbA:
undetectable		 3wipG-4bgbA:
20.77
3wipH-4bgbA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HP1_A_PPFA602_1
(HIV-1 REVERSE
TRANSCRIPTASE P66
SUBUNIT)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 6 ASP A 114
GLY A 137
ASP A 138
ASP A 144
 K  A1357 ( 3.8A)
None
K  A1356 (-3.7A)
K  A1357 ( 2.4A)
 1.24A 5hp1A-4bgbA:
3.8		 5hp1A-4bgbA:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JHD_J_EDTJ301_0
(TCRBETA CHAIN)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 5 LYS A 301
GLU A 323
GLY A 322
SER A 296
 ADP  A1352 (-4.6A)
None
None
None
 1.37A 5jhdJ-4bgbA:
undetectable		 5jhdJ-4bgbA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JQ7_B_T0RB705_1
(ENVELOPE
GLYCOPROTEIN
1,ENVELOPE
GLYCOPROTEIN
1,ENVELOPE
GLYCOPROTEIN 1
ENVELOPE
GLYCOPROTEIN 2)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 7 VAL A 166
ALA A 170
LEU A 295
LEU A 293
 None
 0.59A 5jq7A-4bgbA:
undetectable		 5jq7A-4bgbA:
23.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X19_C_CHDC304_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)		 4bgb PUTATIVE SUGAR
KINASE MK0840
(Methanopyrus
kandleri) 		4 / 5 LEU A 276
PHE A 237
LEU A 226
PHE A 222
 None
 0.91A 5x19C-4bgbA:
undetectable
5x19J-4bgbA:
undetectable		 5x19C-4bgbA:
19.53
5x19J-4bgbA:
11.11