SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4buc'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D4F_A_ADNA601_1
(S-ADENOSYLHOMOCYSTEI
NE HYDROLASE)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 12 LEU A  79
HIS A  75
THR A  76
GLY A  73
PHE A  48
 None
PO4  A1007 (-4.1A)
None
None
None
 1.25A 1d4fA-4bucA:
4.7		 1d4fA-4bucA:
22.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D4F_C_ADNC603_1
(S-ADENOSYLHOMOCYSTEI
NE HYDROLASE)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 12 LEU A  79
HIS A  75
THR A  76
GLY A  73
PHE A  48
 None
PO4  A1007 (-4.1A)
None
None
None
 1.18A 1d4fC-4bucA:
4.6		 1d4fC-4bucA:
22.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KT4_A_RTLA184_0
(PLASMA
RETINOL-BINDING
PROTEIN)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 12 LEU A 227
LEU A 193
ALA A 138
ALA A 136
VAL A 229
 None
 1.20A 1kt4A-4bucA:
undetectable		 1kt4A-4bucA:
16.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_A_TFPA204_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 7 PHE A 442
PHE A 403
MET A 407
SER A 410
 None
None
PO4  A1005 (-4.5A)
None
 0.83A 1wrlA-4bucA:
undetectable
1wrlB-4bucA:
undetectable		 1wrlA-4bucA:
10.40
1wrlB-4bucA:
10.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_B_TFPB203_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 6 PHE A 442
PHE A 403
MET A 407
SER A 410
 None
None
PO4  A1005 (-4.5A)
None
 0.74A 1wrlB-4bucA:
undetectable		 1wrlB-4bucA:
10.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_E_TFPE212_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 7 PHE A 442
PHE A 403
MET A 407
SER A 410
 None
None
PO4  A1005 (-4.5A)
None
 0.93A 1wrlE-4bucA:
undetectable		 1wrlE-4bucA:
10.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AJV_L_COCL501_1
(ANTIBODY 7A1 FAB')		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 7 ALA A 406
TYR A 316
TYR A 326
PHE A 438
 None
 1.01A 2ajvH-4bucA:
undetectable
2ajvL-4bucA:
undetectable		 2ajvH-4bucA:
19.70
2ajvL-4bucA:
19.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GJ5_A_VD3A164_1
(BETA-LACTOGLOBULIN)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 5 ASP A 213
LEU A 216
LYS A 217
ARG A 238
 None
 1.02A 2gj5A-4bucA:
undetectable		 2gj5A-4bucA:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QX6_B_ML1B233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 6 GLY A 318
GLY A 446
PHE A 403
PHE A 438
 None
 0.99A 2qx6A-4bucA:
2.4
2qx6B-4bucA:
2.3		 2qx6A-4bucA:
20.54
2qx6B-4bucA:
20.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X9V_C_TMQC1270_1
(PTERIDINE REDUCTASE)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 10 SER A 299
PHE A 300
TYR A 290
LEU A 271
PRO A 272
 None
 1.46A 2x9vC-4bucA:
4.3		 2x9vC-4bucA:
24.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X9V_D_TMQD1270_1
(PTERIDINE REDUCTASE)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 9 SER A 299
PHE A 300
TYR A 290
LEU A 271
PRO A 272
 None
 1.42A 2x9vD-4bucA:
4.5		 2x9vD-4bucA:
24.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_M_TFPM201_1
(PROTEIN S100-A4)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 7 GLY A 355
PHE A 438
GLY A 378
PHE A 377
 None
 0.81A 3ko0M-4bucA:
undetectable
3ko0P-4bucA:
undetectable		 3ko0M-4bucA:
12.22
3ko0P-4bucA:
12.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SNF_A_ACTA110_0
(PROTEIN P-30)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 5 THR A 137
THR A 135
SER A 134
PHE A 157
 None
PO4  A1001 ( 3.1A)
GOL  A1202 (-4.2A)
None
 1.16A 3snfA-4bucA:
undetectable		 3snfA-4bucA:
11.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4AC9_C_DXCC1478_0
(MJ0495-LIKE PROTEIN)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 7 SER A 177
GLY A 129
THR A 130
PHE A 179
 None
None
PO4  A1000 ( 4.4A)
PO4  A1000 (-4.6A)
 0.92A 4ac9C-4bucA:
4.8		 4ac9C-4bucA:
23.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ACA_C_DXCC1478_0
(TRANSLATION
ELONGATION FACTOR
SELB)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 7 SER A 177
GLY A 129
THR A 130
PHE A 179
 None
None
PO4  A1000 ( 4.4A)
PO4  A1000 (-4.6A)
 0.89A 4acaC-4bucA:
3.6		 4acaC-4bucA:
23.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G0U_F_ASWF101_1
(DNA TOPOISOMERASE
2-BETA)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 6 GLY A  29
ALA A  52
GLU A  51
GLN A 180
 PO4  A1004 ( 3.9A)
PO4  A1007 (-3.4A)
CL  A1401 ( 3.3A)
CL  A1400 (-4.0A)
 1.06A 4g0uA-4bucA:
undetectable		 4g0uA-4bucA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QZU_D_ACTD201_0
(RETINOL-BINDING
PROTEIN 2)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		3 / 3 ASP A 306
HIS A 142
LYS A 308
 None
 0.76A 4qzuD-4bucA:
undetectable		 4qzuD-4bucA:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RRW_C_LURC705_1
(PROSTAGLANDIN G/H
SYNTHASE 2)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 12 LEU A 384
LEU A 362
VAL A 364
ALA A 367
LEU A 341
 None
 1.08A 4rrwC-4bucA:
undetectable		 4rrwC-4bucA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RRZ_C_LURC705_1
(PROSTAGLANDIN G/H
SYNTHASE 2)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 12 LEU A 384
LEU A 362
VAL A 364
ALA A 367
LEU A 341
 None
 1.08A 4rrzC-4bucA:
undetectable		 4rrzC-4bucA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZBQ_A_DIFA601_1
(SERUM ALBUMIN)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 11 LEU A 100
LEU A 108
GLY A  24
ARG A 104
SER A 103
 None
 1.21A 4zbqA-4bucA:
undetectable		 4zbqA-4bucA:
20.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_C_SAMC301_1
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 4 ASP A  94
HIS A 205
SER A 206
GLU A 210
 None
 1.03A 5hfjC-4bucA:
2.7		 5hfjC-4bucA:
18.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TWJ_C_SAMC201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		5 / 12 GLY A  27
LEU A 101
SER A 102
LEU A 108
VAL A  85
 CL  A1402 (-3.5A)
None
None
None
None
 1.11A 5twjC-4bucA:
undetectable		 5twjC-4bucA:
17.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VLM_A_CVIA301_1
(REGULATORY PROTEIN
TETR)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 8 GLY A  24
ARG A  17
VAL A  84
ASP A  83
 None
 0.86A 5vlmA-4bucA:
undetectable		 5vlmA-4bucA:
16.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y9M_X_NIOX401_1
(CASEIN KINASE II
SUBUNIT ALPHA')		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 8 LEU A  63
VAL A  68
VAL A  49
PHE A  25
 None
 0.70A 5y9mX-4bucA:
undetectable		 5y9mX-4bucA:
12.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EKU_A_ZMRA901_2
(SIALIDASE)		 4buc UDP-N-ACETYLMURAMOYL
ALANINE--D-GLUTAMATE
LIGASE
(Thermotoga
maritima) 		4 / 6 ASP A 131
ASN A 231
LEU A 237
PHE A 208
 None
PO4  A1002 (-3.1A)
None
None
 1.11A 6ekuA-4bucA:
undetectable		 6ekuA-4bucA:
20.99