SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4d2o'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GHM_A_CEDA1_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A  70
LYS A  73
SER A 130
ASN A 132
LYS A 234
GLY A 236
None
0.49A 1ghmA-4d2oA:
29.8
1ghmA-4d2oA:
25.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_A_CFXA1300_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
LYS A  73
SER A 130
ASN A 132
GLU A 166
THR A 216
LYS A 234
GLY A 236
None
0.48A 1i2wA-4d2oA:
30.6
1i2wA-4d2oA:
26.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_B_CFXB2300_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
LYS A  73
SER A 130
ASN A 132
GLU A 166
GLY A 236
ARG A 220
None
1.07A 1i2wB-4d2oA:
30.7
1i2wB-4d2oA:
26.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_B_CFXB2300_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
LYS A  73
SER A 130
ASN A 132
GLU A 166
THR A 216
GLY A 236
None
0.50A 1i2wB-4d2oA:
30.7
1i2wB-4d2oA:
26.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1YMX_A_CFXA1001_1
(BETA-LACTAMASE
CTX-M-9)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
LYS A  73
SER A 130
ASN A 132
GLU A 166
THR A 216
LYS A 234
GLY A 236
None
0.61A 1ymxA-4d2oA:
32.6
1ymxA-4d2oA:
31.94
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1YMX_B_CFXB1002_1
(BETA-LACTAMASE
CTX-M-9)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
LYS A  73
SER A 130
ASN A 132
GLU A 166
LYS A 234
GLY A 236
None
0.59A 1ymxB-4d2oA:
32.5
1ymxB-4d2oA:
31.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AX7_A_SALA1336_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
4 / 8 PHE A 264
VAL A 189
LEU A 190
ALA A  47
None
0.99A 3ax7A-4d2oA:
undetectable
3ax7A-4d2oA:
13.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3HLW_A_CE3A301_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 LYS A  73
SER A 130
ASN A 132
THR A 216
LYS A 234
GLY A 236
None
0.57A 3hlwA-4d2oA:
32.6
3hlwA-4d2oA:
31.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3HLW_B_CE3B302_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A 130
ASN A 132
THR A 216
LYS A 234
THR A 235
GLY A 236
None
0.48A 3hlwB-4d2oA:
32.5
3hlwB-4d2oA:
31.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3HUO_A_PNNA300_0
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 12 LYS A  73
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.34A 3huoA-4d2oA:
32.7
3huoA-4d2oA:
31.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MZE_A_CFXA364_1
(D-ALANYL-D-ALANINE
CARBOXYPEPTIDASE
DACA)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A  70
LYS A  73
ASN A 132
THR A 235
GLY A 236
ARG A 220
None
0.76A 3mzeA-4d2oA:
20.4
3mzeA-4d2oA:
23.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NY4_A_SMXA308_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
THR A 216
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.34A 3ny4A-4d2oA:
30.6
3ny4A-4d2oA:
28.12
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3Q07_A_WPPA300_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 12 LYS A  73
SER A 130
ASN A 132
LYS A 234
GLY A 236
None
0.57A 3q07A-4d2oA:
32.5
3q07A-4d2oA:
31.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3Q07_B_WPPB400_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 12 LYS A  73
SER A 130
ASN A 132
LYS A 234
GLY A 236
None
0.59A 3q07B-4d2oA:
32.3
3q07B-4d2oA:
31.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SH8_A_CEDA1_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A  70
SER A 130
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.48A 3sh8A-4d2oA:
30.3
3sh8A-4d2oA:
28.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UNI_A_SALA1344_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
4 / 7 PHE A 264
VAL A 189
LEU A 190
ALA A  47
None
0.99A 3uniA-4d2oA:
undetectable
3uniA-4d2oA:
13.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EUZ_A_MEMA401_1
(CARBAPENEM-HYDROLIZI
NG BETA-LACTAMASE
SFC-1)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 LYS A  73
SER A 130
ASN A 132
THR A 216
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.58A 4euzA-4d2oA:
31.8
4euzA-4d2oA:
29.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4FH2_A_0RNA303_1
(BETA-LACTAMASE SHV-1)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 10 SER A 130
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.32A 4fh2A-4d2oA:
30.0
4fh2A-4d2oA:
30.64
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4FH2_A_0RNA303_1
(BETA-LACTAMASE SHV-1)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 10 SER A 130
ASN A 132
THR A 235
GLY A 236
ARG A 220
None
1.32A 4fh2A-4d2oA:
30.0
4fh2A-4d2oA:
30.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_A_ACTA502_0
(RNA-DEPENDENT RNA
POLYMERASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
4 / 5 LYS A 293
LEU A 294
GLU A 290
LEU A 252
None
1.24A 4k4yA-4d2oA:
undetectable
4k4yA-4d2oA:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_E_ACTE503_0
(RNA-DEPENDENT RNA
POLYMERASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
4 / 4 LYS A 293
LEU A 294
GLU A 290
LEU A 252
None
1.24A 4k4yE-4d2oA:
undetectable
4k4yE-4d2oA:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K4Y_I_ACTI503_0
(RNA-DEPENDENT RNA
POLYMERASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
4 / 5 LYS A 293
LEU A 294
GLU A 290
LEU A 252
None
1.27A 4k4yI-4d2oA:
undetectable
4k4yI-4d2oA:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N9K_A_CEDA301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A  70
SER A 130
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.51A 4n9kA-4d2oA:
30.7
4n9kA-4d2oA:
28.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N9K_B_CEDB301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A  70
SER A 130
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.50A 4n9kB-4d2oA:
30.6
4n9kB-4d2oA:
28.04
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4PM5_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A 130
ASN A 132
THR A 216
LYS A 234
THR A 235
GLY A 236
None
0.49A 4pm5A-4d2oA:
32.3
4pm5A-4d2oA:
31.94
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4PM7_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 LYS A  73
SER A 130
ASN A 132
THR A 216
LYS A 234
GLY A 236
None
0.57A 4pm7A-4d2oA:
32.3
4pm7A-4d2oA:
31.25
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4PM9_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A 130
ASN A 132
THR A 216
LYS A 234
THR A 235
GLY A 236
None
0.46A 4pm9A-4d2oA:
32.4
4pm9A-4d2oA:
30.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHZ_A_CEDA301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 11 SER A  70
SER A 130
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.51A 5ghzA-4d2oA:
30.7
5ghzA-4d2oA:
28.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHZ_B_CEDB301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 10 SER A  70
SER A 130
ASN A 132
LYS A 234
THR A 235
GLY A 236
None
0.50A 5ghzB-4d2oA:
30.8
5ghzB-4d2oA:
28.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NWV_A_ACAA18_2
(SCRFP-TAG,GP41)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
4 / 7 LEU A  60
TRP A  49
ALA A 187
LEU A 260
None
1.05A 5nwvA-4d2oA:
undetectable
5nwvA-4d2oA:
8.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OJ0_A_9WTA801_0
(PENICILLIN-BINDING
PROTEIN 2X)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 12 SER A 130
ASN A 132
THR A 216
GLY A 236
THR A 237
None
1.27A 5oj0A-4d2oA:
6.3
5oj0A-4d2oA:
16.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B5Y_B_9F2B400_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
THR A 216
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.49A 6b5yB-4d2oA:
31.1
6b5yB-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B5Y_D_9F2D400_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
THR A 216
LYS A 234
THR A 235
GLY A 236
THR A 237
GLU A 276
None
0.66A 6b5yD-4d2oA:
31.1
6b5yD-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B68_B_9F2B301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
SER A 130
THR A 216
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.40A 6b68B-4d2oA:
31.2
6b68B-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B68_D_9F2D400_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 ARG A 240
THR A 216
ARG A 220
LYS A 234
GLY A 236
THR A 237
GLU A 276
None
1.14A 6b68D-4d2oA:
31.1
6b68D-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B68_D_9F2D400_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
THR A 216
ARG A 220
LYS A 234
GLY A 236
THR A 237
GLU A 276
None
0.57A 6b68D-4d2oA:
31.1
6b68D-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B69_B_9F2B301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
SER A 130
THR A 216
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.44A 6b69A-4d2oA:
30.9
6b69B-4d2oA:
31.1
6b69A-4d2oA:
13.73
6b69B-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B69_D_9F2D301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
9 / 12 SER A  70
SER A 130
THR A 216
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
GLU A 276
None
0.56A 6b69D-4d2oA:
31.1
6b69D-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6A_B_9F2B301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
THR A 216
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.41A 6b6aB-4d2oA:
31.0
6b6aB-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6A_D_9F2D301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
GLU A 276
None
0.58A 6b6aD-4d2oA:
31.0
6b6aD-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6C_A_9F2A301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
SER A 130
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.49A 6b6cA-4d2oA:
30.9
6b6cA-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6D_A_9F2A302_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
7 / 12 SER A  70
SER A 130
THR A 216
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.38A 6b6dA-4d2oA:
30.8
6b6dA-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6E_A_9F2A302_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
8 / 12 SER A  70
SER A 130
THR A 216
ARG A 220
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.45A 6b6eA-4d2oA:
30.9
6b6eA-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6F_A_9F2A301_1
(BETA-LACTAMASE)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
6 / 12 SER A  70
SER A 130
LYS A 234
THR A 235
GLY A 236
THR A 237
None
0.66A 6b6fA-4d2oA:
30.8
6b6fA-4d2oA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C79_A_CE3A301_1
(BETA-LACTAMASE
TOHO-1)
4d2o PER-2 BETA-LACTAMASE
(Citrobacter
freundii)
5 / 12 SER A 130
ASN A 132
THR A 216
LYS A 234
GLY A 236
None
0.55A 6c79A-4d2oA:
32.3
6c79A-4d2oA:
16.23