SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4dmm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7B_B_HLTB4002_1
(SERUM ALBUMIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
4 / 4 ARG A 212
ALA A 192
ALA A 216
GLU A 218
None
1.08A 1e7bB-4dmmA:
undetectable
1e7bB-4dmmA:
18.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_A_VDYA1002_1
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
4 / 4 ILE A 208
LEU A 246
VAL A 146
ALA A 163
None
0.97A 1mz9A-4dmmA:
undetectable
1mz9A-4dmmA:
10.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_A_VDYA1002_3
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
4 / 5 ILE A 208
LEU A 246
VAL A 146
ALA A 163
None
0.95A 1mz9C-4dmmA:
undetectable
1mz9C-4dmmA:
10.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2J2P_F_SC2F1291_1
(FICOLIN-2)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
4 / 6 LEU A 114
SER A 112
ASP A 109
ASP A 108
None
1.17A 2j2pE-4dmmA:
undetectable
2j2pF-4dmmA:
undetectable
2j2pE-4dmmA:
19.49
2j2pF-4dmmA:
19.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYR_B_SVRB401_4
(NAD-DEPENDENT
DEACETYLASE
SIRTUIN-5)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
4 / 5 ALA A  16
ALA A  29
ALA A  33
VAL A  89
None
0.94A 2nyrB-4dmmA:
5.1
2nyrB-4dmmA:
23.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7K_C_SALC1302_1
(LYSR-TYPE REGULATORY
PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 12 ILE A 191
GLY A 214
TYR A 213
GLY A 244
ILE A 208
None
1.26A 2y7kC-4dmmA:
undetectable
2y7kC-4dmmA:
21.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7P_A_SALA1000_1
(LYSR-TYPE REGULATORY
PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 10 ILE A 191
GLY A 214
TYR A 213
GLY A 244
ILE A 208
None
1.31A 2y7pA-4dmmA:
undetectable
2y7pA-4dmmA:
21.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7W_A_SALA1300_1
(LYSR-TYPE REGULATORY
PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 9 ILE A 191
GLY A 214
TYR A 213
GLY A 244
ILE A 208
None
1.32A 2y7wA-4dmmA:
undetectable
2y7wA-4dmmA:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_D_SAMD603_0
(HYPOTHETICAL PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 12 ILE A  20
GLY A  15
ALA A  23
ALA A  40
ASP A  66
None
SO4  A 301 (-3.6A)
None
SO4  A 301 (-3.4A)
None
1.04A 2yvlD-4dmmA:
7.2
2yvlD-4dmmA:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HCP_B_CHDB1_0
(FERROCHELATASE,
MITOCHONDRIAL)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 10 MET A 195
ARG A 212
PRO A 188
SER A 145
GLY A 244
None
1.41A 3hcpB-4dmmA:
3.5
3hcpB-4dmmA:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IJD_A_C2FA314_0
(UNCHARACTERIZED
PROTEIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 12 THR A  14
VAL A 165
GLY A 164
LEU A 116
ILE A  96
None
1.03A 3ijdA-4dmmA:
undetectable
3ijdA-4dmmA:
22.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UQ6_B_ADNB401_2
(ADENOSINE KINASE,
PUTATIVE)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
4 / 5 LEU A 123
GLY A 120
PHE A  77
ASN A 142
None
1.31A 3uq6B-4dmmA:
7.0
3uq6B-4dmmA:
28.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HFP_D_15UD402_1
(PROTHROMBIN)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 12 LEU A  87
ILE A 140
ALA A  25
ALA A  36
VAL A  35
None
1.12A 4hfpD-4dmmA:
undetectable
4hfpD-4dmmA:
20.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FHZ_D_READ602_1
(ALDEHYDE
DEHYDROGENASE FAMILY
1 MEMBER A3)
4dmm 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE

(Synechococcus
elongatus)
5 / 12 ILE A  24
GLU A  27
ARG A 224
ASN A  92
LEU A 226
None
1.45A 5fhzD-4dmmA:
5.4
5fhzD-4dmmA:
19.70