SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4e4w'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BZF_A_TMQA170_1
(DIHYDROFOLATE
REDUCTASE)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae) 		5 / 12 LEU A 759
ALA A 757
HIS B 857
LEU B 858
PHE B 684
 None
 1.01A 1bzfA-4e4wA:
undetectable		 1bzfA-4e4wA:
18.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IWK_A_CUA1599_0
(NITROUS OXIDE
REDUCTASE)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		3 / 3 CYH B 817
CYH A 769
HIS B 850
 ZN  B 901 (-2.4A)
ZN  B 902 ( 2.2A)
ZN  B 902 (-3.1A)
 0.75A 2iwkA-4e4wB:
2.6		 2iwkA-4e4wB:
16.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IWK_B_CUB1599_0
(NITROUS OXIDE
REDUCTASE)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		3 / 3 CYH B 817
CYH A 769
HIS B 850
 ZN  B 901 (-2.4A)
ZN  B 902 ( 2.2A)
ZN  B 902 (-3.1A)
 0.73A 2iwkB-4e4wB:
2.6		 2iwkB-4e4wB:
16.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QWX_A_ML1A233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		4 / 8 PHE A 533
ILE A 749
PHE A 743
GLY A 563
 None
 0.98A 2qwxA-4e4wA:
undetectable
2qwxB-4e4wA:
undetectable		 2qwxA-4e4wA:
20.47
2qwxB-4e4wA:
20.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ADX_A_IMNA2_2
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 4e4w DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae) 		4 / 7 ILE B 686
ILE B 821
LEU B 858
LEU B 839
 None
 0.79A 3adxA-4e4wB:
undetectable		 3adxA-4e4wB:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DTU_B_CUB1022_0
(CYTOCHROME C OXIDASE
SUBUNIT 2)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		3 / 3 CYH B 817
CYH A 769
HIS B 850
 ZN  B 901 (-2.4A)
ZN  B 902 ( 2.2A)
ZN  B 902 (-3.1A)
 0.80A 3dtuB-4e4wB:
undetectable		 3dtuB-4e4wB:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DTU_D_CUD3_0
(CYTOCHROME C OXIDASE
SUBUNIT 2)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		3 / 3 CYH B 817
CYH A 769
HIS B 850
 ZN  B 901 (-2.4A)
ZN  B 902 ( 2.2A)
ZN  B 902 (-3.1A)
 0.81A 3dtuD-4e4wB:
undetectable		 3dtuD-4e4wB:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OWX_A_XRAA233_2
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		4 / 5 VAL A 754
PHE A 533
ILE A 749
PHE A 743
 None
 1.02A 3owxB-4e4wA:
undetectable		 3owxB-4e4wA:
20.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DF3_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		5 / 12 GLY B 678
THR B 831
VAL B 700
ALA A 550
VAL B 677
 None
 1.42A 4df3B-4e4wB:
undetectable		 4df3B-4e4wB:
22.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FGL_A_CLQA303_0
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		5 / 12 GLY A 563
VAL A 754
PHE A 533
ILE A 749
PHE A 743
 None
 1.25A 4fglA-4e4wA:
undetectable
4fglB-4e4wA:
undetectable		 4fglA-4e4wA:
20.13
4fglB-4e4wA:
20.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G10_A_ACTA301_0
(GLUTATHIONE
S-TRANSFERASE
HOMOLOG)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		4 / 6 ILE A 514
TYR A 630
TYR A 631
PHE A 578
 None
 1.20A 4g10A-4e4wA:
undetectable		 4g10A-4e4wA:
21.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PEV_C_ADNC501_1
(MEMBRANE LIPOPROTEIN
FAMILY PROTEIN)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae) 		5 / 12 VAL A 539
LEU A 762
PHE A 766
PHE B 680
GLY B 683
 None
 1.43A 4pevC-4e4wA:
undetectable		 4pevC-4e4wA:
20.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QOG_A_ML1A302_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		4 / 8 PHE A 533
ILE A 749
PHE A 743
GLY A 563
 None
 0.98A 4qogA-4e4wA:
undetectable
4qogB-4e4wA:
undetectable		 4qogA-4e4wA:
20.47
4qogB-4e4wA:
20.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XJE_A_TOYA202_1
(AADB)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae) 		4 / 8 ASP A 752
ASP A 561
ASP B 870
TYR B 871
 None
 1.02A 4xjeA-4e4wA:
undetectable		 4xjeA-4e4wA:
23.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BYJ_A_OQRA302_0
(SULFOTRANSFERASE)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		5 / 12 HIS A 748
LEU A 529
THR A 530
LEU A 575
THR A 576
 None
None
GOL  A 802 ( 4.4A)
EDO  A 806 ( 4.5A)
EDO  A 806 (-4.4A)
 1.12A 5byjA-4e4wA:
undetectable		 5byjA-4e4wA:
23.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5T2Z_B_017B201_2
(PROTEASE)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		6 / 12 GLY A 574
ASP A 577
VAL A 509
ILE A 689
SER A 513
ILE A 514
 None
 1.40A 5t2zB-4e4wA:
undetectable		 5t2zB-4e4wA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TOA_B_ESTB601_1
(ESTROGEN RECEPTOR
BETA)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
(Saccharomyces
cerevisiae) 		5 / 12 LEU A 627
LEU A 649
ILE A 584
LEU A 586
LEU A 655
 None
 1.19A 5toaB-4e4wA:
undetectable		 5toaB-4e4wA:
22.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WGG_A_SAMA504_0
(RADICAL SAM DOMAIN
PROTEIN)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		5 / 12 PHE A 720
THR A 707
THR B 688
VAL A 542
VAL A 541
 None
 0.99A 5wggA-4e4wA:
1.1		 5wggA-4e4wA:
22.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WHY_A_SAMA504_0
(RADICAL SAM DOMAIN
PROTEIN)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		5 / 11 PHE A 720
THR A 707
THR B 688
VAL A 542
VAL A 541
 None
 0.89A 5whyA-4e4wA:
undetectable		 5whyA-4e4wA:
22.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WHY_A_SAMA504_0
(RADICAL SAM DOMAIN
PROTEIN)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		5 / 11 TYR B 695
PHE A 720
THR A 707
THR B 688
VAL A 542
 None
 1.29A 5whyA-4e4wB:
undetectable		 5whyA-4e4wB:
18.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WHY_B_SAMB504_0
(RADICAL SAM DOMAIN
PROTEIN)		 4e4w DNA MISMATCH REPAIR
PROTEIN MLH1
DNA MISMATCH REPAIR
PROTEIN PMS1
(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		5 / 10 PHE A 720
THR A 707
THR B 688
VAL A 542
VAL A 541
 None
 0.94A 5whyB-4e4wA:
0.0		 5whyB-4e4wA:
22.84